Job Description P0ABJ3 Confidence 100.00% Date Thu Jan 5 11:15:36 GMT 2012 Rank 4 Aligned Residues 185 % Identity 28% Template d1m56c_ SCOP info Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Resolution 2.30

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.											.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.													.
Query Sequence		E	H	G	H	H	D	A	G	G	T	K	I	F	G	F	W	I	Y	L	M	S	D	C	I	L	F	S	I	L	F	A	T	Y	A	V	L	V	N	G	T	A	.	.	.	.	.	.	.	.	.	.	G	G	P	T	G	K	D	I	F	E	L	P	.	F	V	L	V	E	T	F	L	L	L	F	S	S	I	T	Y
Query Conservation																																											.	.	.	.	.	.	.	.	.	.													.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		G	D	H	T	P	V	V	R	L	G	L	R	W	G	F	I	L	F	I	M	S	E	V	M	F	F	S	A	W	F	W	S	F	F	K	H	A	L	Y	P	M	G	P	E	S	P	I	I	D	G	I	F	P	P	E	G	I	I	T	F	D	P	W	H	L	P	L	I	N	T	L	I	L	L	C	S	G	C	A	A
Template Known Secondary structure		T																																						S				T	B	T	T	T	B				S	S		T	T						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		G	M	A	A	I	A	M	.	Y	K	N	N	K	S	Q	V	I	S	W	L	A	L	T	W	L	F	G	A	G	F	I	G	M	E	I	Y	E	F	H	H	L	I	V	N	G	M	G	P	D	R	S	G	F	L	S	A	F	F	A	L	V	G	T	H	G	L	H	V	T	S	G	L	I	W	M	A	V	L	M	V
Query Conservation									.
Alig confidence									.																															.	.	.
Template Conservation																																								.	.	.
Template Sequence		T	W	A	H	H	A	L	V	H	E	N	N	R	R	D	V	A	W	G	L	A	L	A	I	A	L	G	A	L	F	T	V	F	Q	A	Y	E	Y	.	.	.	S	H	A	A	F	G	F	A	G	N	I	Y	G	A	N	F	F	M	A	T	G	F	H	G	F	H	V	I	V	G	T	I	F	L	L	V	C	L	I
Template Known Secondary structure											T																													.	.	.		T		S	S		S	S	S	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	R	R	G	L	T	S	T	N	R	T	R	I	M	C	L	S	L	F	W	H	F	L	D	V	V	W	I	C	V	F	T	V	V	Y	L	M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	Q	R	G	H	F	T	P	E	K	H	V	G	F	E	A	A	I	W	Y	W	H	F	V	D	V	V	W	L	F	L	F	A	S	I	Y	I	W	G
Template Known Secondary structure					T					S	S																											T	T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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