Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABJ3
Confidence11.77%DateThu Jan 5 11:15:36 GMT 2012
Rank6Aligned Residues25
% Identity28%Templatec2k1aA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin alpha-iib; PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150.........160.........170....
Predicted Secondary structure 




Query SS confidence 
























Query Sequence  VTSGLIWMAVLMVQIARRGLTSTNR
Query Conservation 

 


 
                 
Alig confidence 
























Template Conservation 

 




  

  


 




 
Template Sequence  VLGGLLLLTILVLAMWKVGFFKRNR
Template Known Secondary structure  TTTT



Template Predicted Secondary structure 


Template SS confidence 
























   973......980.........990.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions