Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABJ3
Confidence1.17%DateThu Jan 5 11:15:36 GMT 2012
Rank90Aligned Residues8
% Identity50%Templatec2ariA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:envelope polyprotein gp160; PDBTitle: solution structure of micelle-bound fusion domain of hiv-12 gp41
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.....
Predicted Secondary structure 
Query SS confidence 







Query Sequence  FGAGFIGM
Query Conservation 

  

  
Alig confidence 







Template Conservation 

  



Template Sequence  IGALFLGF
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 







   5....10..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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