Job Description P31130 Confidence 86.35% Date Thu Jan 5 11:47:14 GMT 2012 Rank 27 Aligned Residues 73 % Identity 19% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.											.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.						.	.	.																																										.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.						.	.	.																																										.
Query Sequence		K	T	M	H	D	G	A	S	V	S	L	R	G	N	L	I	S	H	K	.	.	.	.	.	.	.	.	.	.	G	E	D	R	Y	.	.	.	V	F	R	D	K	S	G	E	I	N	V	V	I	P	A	A	V	F	D	G	R	E	V	Q	P	D	Q	M	I	N	I	S	G	S	L	D	K	K	S	A	P	.	A
Query Conservation																					.	.	.	.	.	.	.	.	.	.						.	.	.																																										.
Alig confidence																					.	.	.	.	.	.	.	.	.	.						.	.	.																					.																					.
Template Conservation																																																											.
Template Sequence		G	E	L	S	P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	G	S	I	R	V	T	L	W	D	N	L	T	D	I	.	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	E	G	Y	Y	G	G	L
Template Known Secondary structure		G	G			S	S																					T	T	S													T	T									G	G	G	G	G	S	.				T	T													T	T	S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	R	V	T	H	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C	T	A	N	Y	V	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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