Job Description P31130 Confidence 19.34% Date Thu Jan 5 11:47:14 GMT 2012 Rank 68 Aligned Residues 70 % Identity 16% Template c2k50A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:replication factor a related protein; PDBTitle: solution nmr structure of the replication factor a related2 protein from methanobacterium thermoautotrophicum.3 northeast structural genomics target tr91a. Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.		.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.								.	.	.	.																	.																.			.
Query SS confidence																					.	.	.	.	.	.	.	.	.								.	.	.	.																	.																.			.
Query Sequence		K	T	M	H	D	G	A	S	V	S	L	R	G	N	L	I	S	H	K	.	.	.	.	.	.	.	.	.	G	E	D	R	Y	V	F	.	.	.	.	R	D	K	S	G	E	I	N	V	V	I	P	A	A	V	F	.	D	G	R	E	V	Q	P	D	Q	M	I	N	I	S	G	.	S	L	.	D	K	K	S	A
Query Conservation																					.	.	.	.	.	.	.	.	.								.	.	.	.																	.																.			.
Alig confidence																					.	.	.	.	.	.	.	.	.								.	.	.	.																	.																.			.
Template Conservation
Template Sequence		S	K	L	E	E	G	A	E	T	P	V	T	G	R	V	M	K	I	S	S	P	R	T	F	T	T	R	K	G	R	E	G	K	L	A	N	V	I	I	A	D	D	T	G	E	L	R	A	V	F	W	T	E	N	I	K	L	L	K	K	F	R	E	G	D	V	I	R	I	K	D	V	N	I	R	G	G	F	G	G
Template Known Secondary structure		T	T			T	T																					T	T	S	S												T	T									T	T	G	G	G	G	G	G	T			T	T	S													S	S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	V	V	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	E	A	H	L
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions