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Job DescriptionP31130
Confidence96.08%DateThu Jan 5 11:47:14 GMT 2012
Rank4Aligned Residues78
% Identity14%Templatec1b8aB_
PDB info PDB header:ligaseChain: B: PDB Molecule:protein (aspartyl-trna synthetase); PDBTitle: aspartyl-trna synthetase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80. ........90...... ...100.........110.........120
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Query Sequence  TVDFAKTMHDGASVSLRGNLISHKGEDRYVF. . . RDKSGEINVVIPAAV. . . . . . . FDGREVQPDQMINISGSLDKKSAP
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Template Sequence  YSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFKLIPK. LRSEDVVAVEGVVNFTPKA
Template Known Secondary structure 
GGG

GGGTT

SSTTGGGS
GGG.

TT

TTS
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   1006...1010.........1020.........1030.........1040.........1050.........1060..... ....1070.........1080....
 
   121 ........
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Query Sequence  A. . . VVRVTHLQ
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Template Sequence  KLGFEILPEKIV
Template Known Secondary structure  TTS
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   1085....1090......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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