Job Description P39279 Confidence 5.46% Date Thu Jan 5 11:58:48 GMT 2012 Rank 43 Aligned Residues 80 % Identity 15% Template d2axla1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain RecQ helicase DNA-binding domain-like Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		Y	S	Q	P	E	W	K	H	N	L	F	D	H	Y	L	A	V	L	Y	R	F	K	D	E	S	G	K	E	Q	F	S	G	A	V	V	K	T	R	E	A	T	P	G	K	E	I	E	A	I	T	R	R	M	L	D	F	S	P	R	L	K	K	L	A	G	.	V	P	C	Q	V	Y	V	R	T	V	A	A	N	N
Query Conservation																																																																			.
Alig confidence										.																.						.						.	.	.	.	.																									.
Template Conservation										.																.						.						.	.	.	.	.
Template Sequence		Q	T	E	S	W	W	K	A	.	F	S	R	Q	L	I	T	E	G	F	L	V	E	V	S	.	R	Y	N	K	F	.	M	K	I	C	A	.	.	.	.	.	L	T	K	K	G	R	N	W	L	H	K	A	N	T	E	S	Q	S	L	I	L	Q	A	N	E	E	L	C	P	K	K	L	L	L	P	S	S	K	T
Template Known Secondary structure		S								.									S	S					T	.	T	S		T	T	.	T					.	.	.	.	.												T	T	T	T										S		S		T	T
Template Predicted Secondary structure										.																.						.						.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.		90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		261	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	P	L	T	Q	D	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	S	G	T	K	E	H	C
Template Known Secondary structure			S						S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions