 |
Job Description | P39279 | Confidence | 5.17% | Date | Thu Jan 5 11:58:48 GMT 2012 |
Rank | 45 | Aligned Residues | 44 |
% Identity | 16% | Template | c3c5iD_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:choline kinase; |
PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520
|
Resolution | 2.20 Å |
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | D | V | D | C | Q | D | N | G | N | L | E | Y | D | T | Y | S | Q | P | E | W | K | H | N | L | F | D | H | Y | L | A | V | L | Y | R | F | K | D | E | S | G | K | E | Q |
Query Conservation |   |
|   |
|
|   |   |   |   |   |
|
|   |
|   |   |
|   |
|   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | S | V | S | S | Y | P | F | F | E | I | D | K | K | K | Y | I | S | Y | E | N | R | K | L | F | I | T | A | Y | L | S | N | Y | L | D | K | V | V | P | T | P | K | L | I |
Template Known Secondary structure |   |
|
|
|
| S | T | T | S |
|  |  |
| G | G | G | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|