Return to main results Retrieve Phyre Job Id

Job DescriptionP39279
Confidence3.13%DateThu Jan 5 11:58:48 GMT 2012
Rank91Aligned Residues34
% Identity18%Templatec2z5cA_
PDB info PDB header:chaperone/hydrolaseChain: A: PDB Molecule:protein ypl144w; PDBTitle: crystal structure of a novel chaperone complex for yeast2 20s proteasome assembly
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260 .........270....
Predicted Secondary structure 






......


Query SS confidence 



















. . . . . .













Query Sequence  LKKLAGVPCQVYVRTVAANN. . . . . . AQPLTQDQCLRALH
Query Conservation 

 
   



    
 
  ......   
    


 

Alig confidence 



















......













Template Conservation    

  




  

  
        


 


 

  
 
Template Sequence  ISERFNRPCYVTWSSLPSEDPSMLVANHLYILKKCLDLLK
Template Known Secondary structure  TS

TT

TTT
Template Predicted Secondary structure 











Template SS confidence 







































   104.....110.........120.........130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions