Email l.a.kelley@imperial.ac.uk Description P0AFW4 Date Thu Jan 5 11:27:26 GMT 2012 Unique Job ID 6d89c29b3262ba5a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3bmbB_ 100.0 100 PDB header:rna binding protein Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase; PDBTitle: crystal structure of a new rna polymerase interacting2 protein 2 c2pn0D_ 100.0 48 PDB header:transcription Chain: D: PDB Molecule:prokaryotic transcription elongation factor PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea 3 c2p4vA_ 100.0 20 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 4 c1grjA_ 100.0 23 PDB header:transcription regulation Chain: A: PDB Molecule:grea protein; PDBTitle: grea transcript cleavage factor from escherichia coli 5 c2etnA_ 99.9 27 PDB header:transcription Chain: A: PDB Molecule:anti-cleavage anti-grea transcription factor PDBTitle: crystal structure of thermus aquaticus gfh1 6 d2f23a2 99.9 31 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 7 d2etna2 99.9 30 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 8 d1grja2 99.9 23 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 9 c3gtyX_ 92.1 16 PDB header:chaperone/ribosomal protein Chain: X: PDB Molecule:trigger factor; PDBTitle: promiscuous substrate recognition in folding and assembly activities2 of the trigger factor chaperone 10 d1krha1 91.0 13 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 11 d1fdra1 84.7 15 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 12 d1grja1 83.4 27 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 13 d2cnda1 78.8 21 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 14 d1t11a3 78.8 12 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 15 d1gvha2 78.5 12 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 16 d1w26a3 75.6 11 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 17 c1w26B_ 75.5 15 PDB header:chaperone Chain: B: PDB Molecule:trigger factor; PDBTitle: trigger factor in complex with the ribosome forms a2 molecular cradle for nascent proteins 18 d1a8pa1 72.6 18 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 19 d2f23a1 72.5 27 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 20 c2l55A_ 70.1 19 PDB header:metal binding protein Chain: A: PDB Molecule:silb,silver efflux protein, mfp component of the three PDBTitle: solution structure of the c-terminal domain of silb from cupriavidus2 metallidurans 21 d2j3sa2 not modelled 69.8 16 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 22 d1qx4a1 not modelled 67.3 17 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 23 c2gpjA_ not modelled 65.3 15 PDB header:fad-binding protein Chain: A: PDB Molecule:siderophore-interacting protein; PDBTitle: crystal structure of a siderophore-interacting protein (sputcn32_0076)2 from shewanella putrefaciens cn-32 at 2.20 a resolution 24 d1ndha1 not modelled 65.0 20 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 25 c1krhA_ not modelled 58.4 13 PDB header:oxidoreductase Chain: A: PDB Molecule:benzoate 1,2-dioxygenase reductase; PDBTitle: x-ray stucture of benzoate dioxygenase reductase 26 d1ep3b1 not modelled 58.0 16 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 27 c1t11A_ not modelled 55.8 9 PDB header:chaperone Chain: A: PDB Molecule:trigger factor; PDBTitle: trigger factor 28 d1tvca1 not modelled 54.8 17 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 29 d1qfja1 not modelled 53.4 13 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 30 d2piaa1 not modelled 51.4 15 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 31 d1l1pa_ not modelled 49.7 16 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 32 c2kr7A_ not modelled 49.7 10 PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase slyd; PDBTitle: solution structure of helicobacter pylori slyd 33 c2kfwA_ not modelled 48.3 20 PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase PDBTitle: solution structure of full-length slyd from e.coli 34 d1umka1 not modelled 47.0 19 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 35 c1a8pA_ not modelled 46.6 15 PDB header:oxidoreductase Chain: A: PDB Molecule:nadph\:ferredoxin oxidoreductase; PDBTitle: ferredoxin reductase from azotobacter vinelandii 36 c2k7pA_ not modelled 39.4 19 PDB header:structural protein Chain: A: PDB Molecule:filamin-a; PDBTitle: filamin a ig-like domains 16-17 37 c2jf1A_ not modelled 37.9 26 PDB header:cell adhesion Chain: A: PDB Molecule:filamin-a; PDBTitle: crystal structure of the filamin a repeat 21 complexed with2 the integrin beta2 cytoplasmic tail peptide 38 c2k7qA_ not modelled 37.6 19 PDB header:structural protein Chain: A: PDB Molecule:filamin-a; PDBTitle: filamin a ig-like domains 18-19 39 d1fnda1 not modelled 36.6 15 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 40 c1hxvA_ not modelled 35.8 15 PDB header:chaperone Chain: A: PDB Molecule:trigger factor; PDBTitle: ppiase domain of the mycoplasma genitalium trigger factor 41 d1hxva_ not modelled 35.8 15 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 42 d1gawa1 not modelled 35.1 26 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 43 c2k8iA_ not modelled 31.9 29 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: solution structure of e.coli slyd 44 d2d7na1 not modelled 30.5 16 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 45 d2d7ma1 not modelled 29.9 19 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 46 c3pr9A_ not modelled 29.7 29 PDB header:chaperone Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase; PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26 47 c3cgnA_ not modelled 27.6 21 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: crystal structure of thermophilic slyd 48 d2dmca1 not modelled 26.7 16 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 49 c2bgjB_ not modelled 26.4 16 PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp(h) reductase; PDBTitle: x-ray structure of the ferredoxin-nadp(h) reductase from2 rhodobacter capsulatus at 2.1 angstroms 50 d2bmwa1 not modelled 25.0 14 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 51 c3h0gE_ not modelled 23.5 22 PDB header:transcription Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe 52 d2e9ia1 not modelled 23.4 29 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 53 c2l27B_ not modelled 23.4 26 PDB header:membrane protein, peptide binding protei Chain: B: PDB Molecule:peptide agonist; PDBTitle: nmr structure of the ecd1 of crf-r1 in complex with a peptide agonist 54 d1cqxa2 not modelled 23.1 11 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 55 c2pbcD_ not modelled 22.2 18 PDB header:isomerase Chain: D: PDB Molecule:fk506-binding protein 2; PDBTitle: fk506-binding protein 2 56 c3prdA_ not modelled 22.1 29 PDB header:chaperone, isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase; PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26 57 d1eika_ not modelled 21.8 13 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 58 c2rmfA_ not modelled 21.5 22 PDB header:hormone Chain: A: PDB Molecule:urocortin; PDBTitle: human urocortin 1 59 d2diaa1 not modelled 21.4 23 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 60 c1zeqX_ not modelled 21.3 7 PDB header:metal binding protein Chain: X: PDB Molecule:cation efflux system protein cusf; PDBTitle: 1.5 a structure of apo-cusf residues 6-88 from escherichia2 coli 61 d2iv2x1 not modelled 21.1 13 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 62 d1ix5a_ not modelled 21.0 25 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 63 c2h8rA_ not modelled 20.7 14 PDB header:transcription activator/dna Chain: A: PDB Molecule:hepatocyte nuclear factor 1-beta; PDBTitle: hepatocyte nuclear factor 1b bound to dna: mody5 gene2 product 64 d1t9fa_ not modelled 20.1 47 Fold:beta-Trefoil Superfamily:MIR domain Family:MIR domain 65 c2vn1A_ not modelled 20.1 12 PDB header:isomerase Chain: A: PDB Molecule:70 kda peptidylprolyl isomerase; PDBTitle: crystal structure of the fk506-binding domain of plasmodium2 falciparum fkbp35 in complex with fk506 66 c2piaA_ not modelled 20.0 16 PDB header:reductase Chain: A: PDB Molecule:phthalate dioxygenase reductase; PDBTitle: phthalate dioxygenase reductase: a modular structure for2 electron transfer from pyridine nucleotides to [2fe-2s] 67 d2dj4a1 not modelled 19.5 26 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 68 c2e9jA_ not modelled 19.1 19 PDB header:structural protein Chain: A: PDB Molecule:filamin-b; PDBTitle: solution structure of the 14th filamin domain from human2 filamin-b 69 c2lgoA_ not modelled 19.1 10 PDB header:isomerase Chain: A: PDB Molecule:fkbp; PDBTitle: solution nmr structure of a fkbp-type peptidyl-prolyl cis-trans2 isomerase from giardia lamblia, seattle structural genomics center3 for infectious disease target gilaa.00840.a 70 c3entB_ not modelled 18.7 25 PDB header:structural protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of nitrollin, a betagamma-crystallin from2 nitrosospira multiformis-in alternate space group (p65) 71 d1rl2a1 not modelled 18.4 20 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:C-terminal domain of ribosomal protein L2 72 d1kt0a2 not modelled 18.1 8 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 73 d1h0ha1 not modelled 17.8 26 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 74 d2jioa1 not modelled 17.4 29 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 75 d1vqoa1 not modelled 17.4 17 Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:C-terminal domain of ribosomal protein L2 76 d1q1ca1 not modelled 17.2 24 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 77 c2ka3C_ not modelled 17.2 33 PDB header:structural protein Chain: C: PDB Molecule:emilin-1; PDBTitle: structure of emilin-1 c1q-like domain 78 d1qfha1 not modelled 17.2 19 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 79 c1wlfA_ not modelled 17.0 26 PDB header:protein transport Chain: A: PDB Molecule:peroxisome biogenesis factor 1; PDBTitle: structure of the n-terminal domain of pex1 aaa-atpase:2 characterization of a putative adaptor-binding domain 80 d1dzfa2 not modelled 16.9 23 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 81 c2opgB_ not modelled 16.4 19 PDB header:structural protein Chain: B: PDB Molecule:multiple pdz domain protein; PDBTitle: the crystal structure of the 10th pdz domain of mpdz 82 c3o5fA_ not modelled 15.6 14 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase fkbp5; PDBTitle: fk1 domain of fkbp51, crystal form vii 83 d1c9ha_ not modelled 15.6 7 Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase 84 c2xvsA_ not modelled 14.9 14 PDB header:antitumor protein Chain: A: PDB Molecule:tetratricopeptide repeat protein 5; PDBTitle: crystal structure of human ttc5 (strap) c-terminal ob2 domain 85 c3shwA_ not modelled 14.9 19 PDB header:cell adhesion Chain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: crystal structure of zo-1 pdz3-sh3-guk supramodule complex with2 connexin-45 peptide 86 c1qfhB_ not modelled 14.4 19 PDB header:actin binding protein Chain: B: PDB Molecule:protein (gelation factor); PDBTitle: dimerization of gelation factor from dictyostelium2 discoideum: crystal structure of rod domains 5 and 6 87 c2pmzV_ not modelled 14.2 17 PDB header:translation, transferase Chain: V: PDB Molecule:dna-directed rna polymerase subunit h; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 88 d2d7pa1 not modelled 14.0 16 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 89 c3cnkB_ not modelled 13.9 23 PDB header:structural protein Chain: B: PDB Molecule:filamin-a; PDBTitle: crystal structure of the dimerization domain of human2 filamin a 90 d1ogya1 not modelled 13.8 23 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 91 c3pr3B_ not modelled 13.8 33 PDB header:isomerase Chain: B: PDB Molecule:glucose-6-phosphate isomerase; PDBTitle: crystal structure of plasmodium falciparum glucose-6-phosphate2 isomerase (pf14_0341) in complex with fructose-6-phosphate 92 d1r5pa_ not modelled 13.8 22 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:KaiB-like 93 d2diba1 not modelled 13.6 29 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 94 d1cm3a_ not modelled 13.3 20 Fold:HPr-like Superfamily:HPr-like Family:HPr-like 95 d1gr3a_ not modelled 13.1 28 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 96 c1gr3A_ not modelled 13.1 28 PDB header:collagen Chain: A: PDB Molecule:collagen x; PDBTitle: structure of the human collagen x nc1 trimer 97 d1vlfm1 not modelled 12.8 22 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 98 c3ujhB_ not modelled 12.7 47 PDB header:isomerase Chain: B: PDB Molecule:glucose-6-phosphate isomerase; PDBTitle: crystal structure of substrate-bound glucose-6-phosphate isomerase2 from toxoplasma gondii 99 c3fpkB_ not modelled 12.6 16 PDB header:flavoprotein, oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: crystal structure of ferredoxin-nadp reductase from salmonella2 typhimurium