PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3fpkB_

Fold library id	PDB Header	Molecule	Title
c3fpkB_	PDB header: flavoprotein, oxidoreductase	Chain: B: PDB Molecule: ferredoxin-nadp reductase;	PDBTitle: crystal structure of ferredoxin-nadp reductase from2 salmonella typhimurium

Links to external resources
Added to library: Tue Mar 16 12:09:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A D W V T G K V T K V Q N W T D A L F S L T V H A P I N P F T A G Q F T K L G L E I D G E R V Q R A Y S Y V N A P D N P N L E F Y L V T V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
T T
S
T T
S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q G K L S P R L A A L K P G D E V Q V V S D A S G F F V L D E V P D C E T L W M L A T G T A I G P Y L S I L Q Y G Q D V A R F K N L V L V H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S T
T T
S S
B
S
S G G G S
S G G G G
S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A A R F A A D L S Y L P L M L E L Q Q R Y E G K L R I Q T V V S R E N V P G S L T G R V P A L I E N G E L E K A V G L P M D K E T S H V M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S G G G
T T T T T S S S
T T
S
T S T S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence C G N P Q M V R D T Q Q L L K E T R Q M T K H L R R R P G H M T A E H Y W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
B T T B
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	W	V	T	G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	I	N	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	G	E	R	V	Q	R	A	Y	S	Y	V	N	A	P	D	N	P	N	L	E	F	Y	L	V	T	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S	S															T	T										T	T											S		T	T		S	S									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	G	K	L	S	P	R	L	A	A	L	K	P	G	D	E	V	Q	V	V	S	D	A	S	G	F	F	V	L	D	E	V	P	D	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	Y	G	Q	D	V	A	R	F	K	N	L	V	L	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S						T			T	T							S	S		B		S		S	G	G	G	S				S								G	G	G	G												S		T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	A	R	F	A	A	D	L	S	Y	L	P	L	M	L	E	L	Q	Q	R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	N	V	P	G	S	L	T	G	R	V	P	A	L	I	E	N	G	E	L	E	K	A	V	G	L	P	M	D	K	E	T	S	H	V	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	G	G	G		T	T											T	T	T	S								S	S				T	T				S								T	S							T	S				T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	K	E	T	R	Q	M	T	K	H	L	R	R	R	P	G	H	M	T	A	E	H	Y	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						B		B	T	T	B			S