Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFW4
Confidence78.83%DateThu Jan 5 11:27:26 GMT 2012
Rank13Aligned Residues72
% Identity21%Templated2cnda1
SCOP infoReductase/isomerase/elongation factor common domain Riboflavin synthase domain-like Ferredoxin reductase FAD-binding domain-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50...... ...60.........70 .........80.........90.
Predicted Secondary structure 






...............






..











............
Query SS confidence 















. . . . . . . . . . . . . . .













. .




















. . . . . . . . . . . .
Query Sequence  AQMCSPEEMPHDVVTM. . . . . . . . . . . . . . . NSRVKFRNLSDGEV. . RVRTLVYPAKMTDSNTQLSVM. . . . . . . . . . . .
Query Conservation 
 

     
 
 
  ...............

 
          ..    

 
 

      


 ............
Alig confidence 















...............













..







...









............
Template Conservation    
     

 
     
             

 
 
     
    
 

  
 ...
                     
Template Sequence  CRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSM. . . VDEIGHFDLLVKVYFKNEHPKF
Template Known Secondary structure  TT
SSTT





TT
TT


S
...TT

S


SS
BTTB
Template Predicted Secondary structure 























...














Template SS confidence 















































































   15....20.........30.........40.........50.........60......... 70.........80.........90.
 
   92.......100.........110.....
Predicted Secondary structure  ...












Query SS confidence  . . .























Query Sequence  . . . APVGAALLGLRVGDSIHWELPGGV
Query Conservation  ...



 



   

 
    
 
 
Alig confidence  ...























Template Conservation    

  
  
  
  

 
 
 

 
 
Template Sequence  PNGGLMTQYLDSLPVGSYIDVKGPLGH
Template Known Secondary structure  TT



TT

S
Template Predicted Secondary structure 













Template SS confidence 


























   92.......100.........110........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions