Job Description P0AFW4 Confidence 20.68% Date Thu Jan 5 11:27:26 GMT 2012 Rank 63 Aligned Residues 56 % Identity 14% Template c2h8rA_ PDB info PDB header:transcription activator/dna Chain: A: PDB Molecule:hepatocyte nuclear factor 1-beta; PDBTitle: hepatocyte nuclear factor 1b bound to dna: mody5 gene2 product Resolution 3.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	T	I	I	I	N	D	L	D	A	E	R	I	D	I	L	L	E	Q	P	A	Y	A	G	L	P	I	A	D	A	L	N	A	E	L	D	R	A	Q	M	C	S	P	E	E	M	P	H	D	V	V	T	M	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	R	F	K	W	G	P	A	S	Q	Q	I	L	Y	Q	A	Y	D	R	Q	K	N	P	S	K	E	E	R	E	A	L	V	E	E	C	N	R	A	E	C	L	Q	R	G	V	S	P	S	K	A	H	G	L	G	S
Template Known Secondary structure																							S	S																					T	T			S	T	T	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions