Job Description P33218 Confidence 24.64% Date Thu Jan 5 11:51:18 GMT 2012 Rank 28 Aligned Residues 87 % Identity 11% Template d1vola2 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.70

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	D	Q	Q	L	R	G	A	G	V	E	E	Q	G	R	V	L	I	E	Q	A	I	E	Q	P	L	D	P	Q	R	L	A	T	G	V	R	N	E	E	E	A	L	E	I	Y	F	L	S	C	A	A	I	D	I	D	H	F	M	E	R	S	Y	L	N	A	L	G	D	A	L	K	I	P	Q	D	V	R	D
Query Conservation
Alig confidence																																																												.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		D	F	M	S	R	F	C	S	N	L	C	L	P	K	Q	V	Q	M	A	A	T	H	I	A	R	K	A	V	E	L	D	L	V	P	G	R	S	P	I	S	V	A	A	A	A	I	Y	M	A	S	Q	A	S	A	E	K	R	T	.	.	.	.	.	.	Q	K	E	I	G	D	I	A	G	V	A	D	V	T	I	R
Template Known Secondary structure		G	T									T																			T	T		S	T	T																	T	S	S	S				.	.	.	.	.	.									T
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	R	D	L	E	Q	Q	K	R	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	Y	R	L	I	Y	P	R	A	P	D	L
Template Known Secondary structure								G	G	G
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions