Job Description P33218 Confidence 7.68% Date Thu Jan 5 11:51:18 GMT 2012 Rank 93 Aligned Residues 52 % Identity 12% Template d1or7a1 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.00

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	K	E	R	A	A	I	D	Q	Q	L	R	G	A	G	V	E	E	Q	G	R	V	L	I	E	Q	A	I	E	Q	P	L	D	P	Q	R	L	A	T	G	V	R	N	E	E	E	A	L	E	I	Y	F
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		L	S	E	E	L	R	Q	I	V	F	R	T	I	E	S	.	.	L	P	E	D	L	R	M	A	I	T	L	R	E	L	D	G	L	S	Y	E	E	I	A	A	I	M	D	C	P	V	G	T	V	R	S	R	I
Template Known Secondary structure																	.	.	S													T	T											T	T	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions