Return to main results Retrieve Phyre Job Id

Job DescriptionP33218
Confidence22.47%DateThu Jan 5 11:51:18 GMT 2012
Rank30Aligned Residues34
% Identity15%Templated1d5ya1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.. .......170.
Predicted Secondary structure 





.
Query SS confidence 
























.








Query Sequence  EQGRVLIEQAIEQPLDPQRLATGVR. NEEEALEIY
Query Conservation   
 
  
  

  
 
   

  
 .    




Alig confidence 
























.








Template Conservation       

       
 
  

     
   
 
 
Template Sequence  RDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMF
Template Known Secondary structure  TTSSSS


TTTSS
Template Predicted Secondary structure 








Template SS confidence 


































   8.10.........20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions