Job Description P0AFS7 Confidence 4.92% Date Thu Jan 5 11:27:10 GMT 2012 Rank 22 Aligned Residues 272 % Identity 7% Template d2hyda2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.00

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	A	I	M	I	V	A	C	L	W	I	V	Q	P	F	I	L	G	F	A	W	A	G	T	V	V	I	A	T	W	P	V	L	L	R	L	Q	K	I	M	F	G	R	R	S	L	A	V	L	V	M	T	L	L	L	V	M	V	F	I	I	P	I	A	L	L	V	N	S	I	V	D	G	S	G	P	L	I	K
Query Conservation
Alig confidence																																												.	.
Template Conservation																																												.	.
Template Sequence		I	F	A	T	I	I	V	G	I	I	K	F	G	I	P	M	L	I	P	L	L	I	K	Y	A	I	D	G	V	I	N	N	H	A	L	T	T	D	E	K	V	H	.	.	H	L	T	I	A	I	G	I	A	L	F	I	F	V	I	V	R	P	P	I	E	F	I	R	Q	Y	L	A	Q	W	T	S	N	K	I	L
Template Known Secondary structure											T	T	T																		T	T		S	S									.	.																T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.								.	.	.	170	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.
Query Sequence		A	I	S	S	G	D	M	T	L	P	D	L	A	W	L	N	T	I	P	V	I	G	A	K	L	Y	A	G	W	H	N	L	L	D	M	G	G	T	A	I	M	A	K	V	R	P	Y	I	G	T	T	T	T	W	F	V	G	Q	A	A	H	I	G	R	F	M	V	H	.	.	.	.	.	.	.	C	A	L	M	L
Query Conservation																																																																						.	.	.	.	.	.	.
Alig confidence				.	.																																																																	.	.	.	.	.	.	.
Template Conservation				.	.
Template Sequence		Y	D	.	.	I	R	K	K	L	Y	N	H	L	Q	A	L	S	A	R	F	Y	A	N	N	Q	V	G	Q	V	I	S	R	V	I	N	D	V	E	Q	T	K	D	F	I	L	T	G	L	M	N	I	W	L	D	C	I	T	I	I	I	A	L	S	I	M	F	F	L	D	V	K	L	T	L	A	A	L	F	I	F
Template Known Secondary structure				.	.												S							T	S																T																														T	T	T					T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		94	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	S	A	L	L	Y	W	R	G	E	Q	V	A	Q	G	I	R	H	F	A	T	R	L	A	G	V	R	G	D	A	A	V	L	L	A	A	Q	A	I	R	A	V	A	L	G	V	V	V	T	A	L	V	Q	A	V	L	G	G	I	G	L	A	V	S	G	V	P	Y	A	T	L	L	T	V	L	M	I	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	Y	I	L	T	V	Y	V	F	F	G	R	L	R	K	L	T	R	E	R	S	Q	A	L	A	E	V	Q	G	F	L	H	E	R	V	Q	G	I	S	V	V	K	S	F	A	I	E	D	N	E	A	K	N	F	D	K	K	N	T	N	F	L	T	R	A	L	K	H	T	R	W	N	A	Y	S	F	A	A	I
Template Known Secondary structure																																														T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	V	Q	L	G	P	L	P	V	L	I	P	A	I	I	W	L	Y	W	T	G	D	T	T	W	G	T	V	L	L	V	W	S	G	V	V	G	T	L	D	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	V	T	D	I	G	P	I	I	V	I	G	V	G	A	Y	L	A	I	S	G	S	I	T	V	G	T	L	A	A	F	V	G	Y	L	E	L	L	F	G	P	L
Template Known Secondary structure																							T	S												T					T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions