Job Description P0AFS7 Confidence 3.01% Date Thu Jan 5 11:27:10 GMT 2012 Rank 65 Aligned Residues 196 % Identity 8% Template d1pf4a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.80

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	L	W	I	V	Q	P	F	I	L	G	F	A	W	A	G	T	V	V	I	A	T	W	P	V	L	L	R	L	Q	K	I	M	F	G	R	R	S	L	A	V	L	V	M	T	L	L	L	V	M	V	F	I	I	P	I	A	L	L	V	N	S	I	V	D	G	S	G	P	L	I	K	A	I	S	S	G	D	M
Query Conservation
Alig confidence																																																																													.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		G	L	V	V	S	T	I	A	L	V	I	N	A	A	A	D	T	Y	M	I	S	L	L	K	P	L	L	D	E	G	F	G	N	A	E	S	N	F	L	R	I	L	P	F	M	I	L	G	L	M	F	V	R	G	L	S	G	F	A	S	S	Y	C	L	S	W	V	S	G	N	V	V	M	Q	M	.	.	.	R	R
Template Known Secondary structure																												T	T	S	S		S					S																												T	T	T	G	G	G						.	.	.
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	P	D	L	A	W	L	N	T	I	P	V	I	G	A	K	L	Y	A	G	W	H	N	L	L	D	M	G	G	T	A	I	M	A	K	V	R	P	Y	I	G	T	T	T	T	W	F	V	G	Q	A	A	H	I	.	.	.	.	.	.	.	.	.	.	.	G	R	F	M	V	H	C	A	L	M	L	L	F	S
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	F	N	H	F	M	H	M	P	V	R	F	F	D	Q	E	S	T	G	G	L	L	S	R	I	T	Y	D	S	E	Q	V	A	G	A	T	S	R	A	L	V	S	I	V	R	E	G	A	S	I	I	G	L	L	T	L	M	F	W	N	S	W	Q	L	S	L	V	L	I	V	V	A	P	V	V	A	F	A	I
Template Known Secondary structure					T	T	T		S	S								T	T											G	G	G																T	T					G	G	G	G	G	G	S				S		T					G	G	G								T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	Y	W	R	G	E	Q	V	A	Q	G	I	R	H	F	A	T	R	L	A	G	V	R	G	D	A	A	V	L	L	A	A	Q	A	I	R	A	V	A	L	G	V	V	V	T	A	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	V	S	K	R	F	R	K	I	S	R	N	M	Q	T	A	M	G	H	R	Q	Q	T	M	K	L	V	S	A	Q	S	I	A	D	P	V	I	Q	M	I	A	S	L	A	L	F	A	V	L
Template Known Secondary structure		T	G	G	G	G												T	T												G	G	G	G										T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions