Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS7
Confidence5.72%DateThu Jan 5 11:27:10 GMT 2012
Rank19Aligned Residues85
% Identity8%Templated1iwga8
SCOP infoMultidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   277..280.........290.........300.........310.........320.........330....... ..340.........350..
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Query Sequence  WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVS. . . . WRLFAAWVEEVPPPT
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Template Sequence  AISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEG
Template Known Secondary structure  TT
SSSGGGTT

B
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   878.880.........890.........900.........910.........920.........930.........940.........950.......
 
   353......360.
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Query Sequence  DQPEEILEE
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Template Sequence  KGLIEATLD
Template Known Secondary structure 

TT
Template Predicted Secondary structure 

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   958.960......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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