 |
Job Description | P40120 | Confidence | 7.87% | Date | Thu Jan 5 12:01:11 GMT 2012 |
Rank | 55 | Aligned Residues | 63 |
% Identity | 19% | Template | d1b2pa_ |
SCOP info | beta-Prism II
| alpha-D-mannose-specific plant lectins
| alpha-D-mannose-specific plant lectins
|
Resolution | 1.70 |
|
 |
  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | S | A | S | I | T | G | A | Y | K | F | T | I | H | C | E | K | S | Q | V | I | M | D | V | E | N | H | L | Y | A | R | K | D | I | K | Q | L | G | I | A | P | M | T | S | M | F | S | C | G | T | N | E | R | R | M | C | D | T | I | H | P | Q | I | H | D | S | D | R | L | S | M | W | R | G | N | G | E | W | I |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|   |   |   |   |
|   |   |
|
Template Sequence |   |
L | E | I | L | F | G | T | H | V | Y | R | F | I | M | Q | T | D | C | N | L | V | L | Y | D | N | N | N | P | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | A | T | N | T | G | G | L | G | N | G | C | R | A | V | L | Q | P | D | G | V | L | V | V | I | T | N | E | N | V | T | V |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | T | T |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
| T | T | S |
| S | S |
|  |  |  |  |
| T | T | S |
|  |  |  |  |
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
315 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
C | R |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
|
|
Template Sequence |   |
W | Q |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
84 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|