Return to main results Retrieve Phyre Job Id

Job DescriptionP40120
Confidence10.19%DateThu Jan 5 12:01:11 GMT 2012
Rank34Aligned Residues89
% Identity9%Templatec3phuA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rna-directed rna polymerase l; PDBTitle: otu domain of crimean congo hemorrhagic fever virus
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80. ........90.........100.........110.......
Predicted Secondary structure 




















.























Query SS confidence 










































.



































Query Sequence  DGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAY. NSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVR
Query Conservation        
 
  
   

 

  

  
   

  
  
 

 
.
 


    


      

 

 

 
  
  

 
Alig confidence 





























...









.



...






......















Template Conservation              



   


      

...   
 
 


   
 ...    


...... 


 


    
 

Template Sequence  MPNKTDHSYHYIKRLTESAARKYYQEEPEA. . . RLVGLSLEDYLKRML. . . SDNEWGS. . . . . . TLEASMLAKEMGITII
Template Known Secondary structure 
TT

TTTGGG
...


...STT



......TT

Template Predicted Secondary structure 









...




...






......


Template SS confidence 















































































   50.........60.........70......... 80.........90.... .....100. ........110.......
 
   118.120.........130.........
Predicted Secondary structure 







Query SS confidence 





















Query Sequence  MFSVDPATHLAREIHFRPELFK
Query Conservation 
  
    
 
  
 
    
 
Alig confidence 





















Template Conservation 
  
  
  
     



   
Template Sequence  IWTVAASDEVEAGIKFGDGDVF
Template Known Secondary structure  SSSSBSS

TT
Template Predicted Secondary structure 










Template SS confidence 





















   118.120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions