Job Description P77774 Confidence 96.81% Date Thu Jan 5 12:32:43 GMT 2012 Rank 122 Aligned Residues 310 % Identity 11% Template d2bgra1 SCOP info 8-bladed beta-propeller DPP6 N-terminal domain-like DPP6 N-terminal domain-like Resolution 2.0

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.										.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	.	.	.	.	.	.	.	.	.	S	E	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W
Query Conservation																																																							.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.
Template Sequence		Y	L	Y	K	Q	E	N	N	I	L	V	F	N	A	E	Y	G	N	S	.	.	.	S	V	F	L	E	N	S	T	F	D	E	F	G	H	S	I	N	D	Y	S	I	S	P	D	G	Q	F	I	L	L	E	Y	N	Y	V	K	Q	W	R	H	S	Y	T	A	S	Y	D	I	Y	D	L	N	K	R	Q	L	I	T
Template Known Secondary structure						S	S	S							T	T	T				.	.	.						T	T	T	T	T	T	S	S	S									T	T	S	S												S	S	S											T	T	T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	T	A	F	G	A	A	V
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	R	I	P	N	N	T	Q	W	V	T	W	S	P	V	G	H	K	L	A	Y	V	W	N	N	D	I	Y	V	K	I	E	P	N	L	P	S	Y	R	I	T	W	T	G	K	E	D	I	I	Y	N	G	I	T	D	W	V	Y	E	E	E	V	F	S	A	Y	S	A	L	W	W	S	P	N	G	T	F	L	A
Template Known Secondary structure		S	S				T	T								S	S	T	T							T	T						S	S	T	T	S							S			B	T	T	T				S	B									T	S	S	S	S	B						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		209	210	.	.	.	.	.																																					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	G	D	N	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	Q	F	N	D	T	E	V	P	L	I	E	Y	S	F	Y	S	D	E	S	L	Q	Y	P	K	T	V	R	V	P	Y	P	K	A	G	A	V	N	P	T	V	K	F	F	V	V	N	T	D	S	L	S	S	V	T	N	A	T	S	I	Q	I	T	A	P	A	S	M	L	I	G	D	H	Y	L	C	D	V	T
Template Known Secondary structure								T	T											S	T	T		S	S											T	T	S												G	G	G			S	S	S															T	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
			253	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.																						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.										.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.										.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	V	V	N	G	V	V	F	A	L	.	.	.	.	.	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V
Query Conservation		.										.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.										.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	T	Q	E	R	I	S	L	Q	W	L	R	R	I	Q	N	Y	S	V	M	D	I	C	D	Y	D	E	S	S	G	R	W	N	C	L	V	A	R	Q	H	I	E	M	S	T	T	G	W	V	G	R	F	R	P	S	E	P	H	F	T	L	D	G	N	S	F	Y	K	I	I	S	N	E	E	G	Y	R	H	I
Template Known Secondary structure					T	T									S	S	T	T											T	T	T	T						G	G	G							S	S	S		S	S	S	S	S								T	T	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.							.	.	.	.	350	.	.	.	.	.	.	.	.	.	360					.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.																.	.	.	.
Query SS confidence																																										.	.	.	.	.	.																.	.	.	.
Query Sequence		M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	E	G	Y	.	.	.	.	.	.	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	.	.	.	.	K	V	D	S	S	G	F	Q	T	E	P	V	A	A	D
Query Conservation																																										.	.	.	.	.	.																.	.	.	.
Alig confidence																																										.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		C	Y	F	Q	I	D	K	K	D	C	T	F	I	T	K	G	T	W	E	V	I	G	I	E	A	L	T	S	D	Y	L	Y	Y	I	S	N	E	Y	K	G	M	P	G	G	R	N	L	Y	K	I	Q	L	S	D	Y	T	K	V	T	C	L	S	C	E	L	N	P	E	R	C	Q	Y	Y	S	V	S	F	S	K	E
Template Known Secondary structure						T	T		S					S			S	S	S										S	S							S		G	G	G		T	T		B							T	T		T	T					S	S	T	T	T	S	T	T	T	B		B							T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		376	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	L	I	Q	A	K	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	Y	Y	Q	L	R	C	S	G
Template Known Secondary structure		S	S								S
Template Predicted Secondary structure
Template SS confidence
		465	.	.	.	.	470	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions