Job Description P77774 Confidence 98.39% Date Thu Jan 5 12:32:43 GMT 2012 Rank 84 Aligned Residues 308 % Identity 12% Template d1sq9a_ SCOP info 7-bladed beta-propeller WD40 repeat-like WD40-repeat Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		S	T	S	V	G	S	G	I	G	N	F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	.	.	.	.	.	H	V	Y
Query Conservation																																																																										.	.	.	.	.
Alig confidence																			.	.																																																						.	.	.	.	.
Template Conservation																			.	.
Template Sequence		T	A	N	A	G	K	A	H	D	A	D	I	F	S	V	S	A	.	.	C	N	S	F	T	V	S	C	S	G	D	G	Y	L	K	V	W	D	N	K	L	L	D	N	E	N	P	K	D	K	S	Y	S	H	F	V	H	K	S	G	L	H	H	V	D	V	L	Q	A	I	E	R	D	A	F	E	L	C	L	V	A
Template Known Secondary structure						S	S		S	S	S								.	.		S	S							T	T	S							S	B			T	T			G	G	G	G								T	T													T	T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	S	E	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	S	F	S	G	D	L	L	F	Y	R	I	T	R	E	D	E	T	K	K	V	I	F	E	K	L	D	L	L	D	S	D	M	K	K	H	S	F	W	A	L	K	W	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N
Template Known Secondary structure					T	T	S											T	T	T											S		T	T	G	G	G	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																																	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.									.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	.	.	.	.	.	.	.	.	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	R	L	V	A	T	D	V	K	G	T	T	Y	I	W	K	F	H	P	F	A	D	E	S	N	S	L	T	L	N	W	S	P	T	L	E	L	Q	G	T	V	E	S	P	M	T	P	S	Q	F	A	T	S	V	D	I	S	E	R	G	L	I	A	T	G	F	N	N	G	T	V	Q	I	S	E	L	S	T	L
Template Known Secondary structure										T	T	S									S	S	S	S					T	T	T															S	S	S	S											T	T	S							T	T	S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.											.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.							.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Query Sequence		Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	.	.	.	.	.	.	.	.	.	.	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	.	.	.	.	.	.	N	G	N	L	V	V
Query Conservation																													.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	Y	N	F	E	S	Q	H	N	N	S	N	S	I	R	S	V	K	F	S	P	Q	G	S	L	L	A	I	A	H	D	S	N	S	F	G	C	I	T	L	Y	E	T	E	F	G	E	R	I	G	S	L	S	V	P	G	E	F	A	H	S	S	W	V	M	S	L	S	F	N	D	S	G	E	T	L	C	S
Template Known Secondary structure																								S	S	T	T									T	T									T	T	T									B				B	S	B	S	S									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																						.	.	.	.	.	.	.	.	370	.	.	.	.	.	.												.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	S	S	G	F	Q	T	E	P	V	A	A	D	G	.	.	.	.	.	.	.	.	.	.	.	K	L	L	I	Q	A	K	D	G	T	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	W	D	G	K	L	R	F	W	D	V	K	T	K	E	R	I	T	T	L	N	M	H	C	D	D	I	E	I	E	E	D	I	L	A	V	D	E	H	G	D	S	L	A	E	P	G	V	F	D	V	K	F	L	K	K	G	W	R	S	G	M	G	A	D	L	N	E	S	L	C	C	V	C	L	D	R	S	I
Template Known Secondary structure				T	T	S							T	T	T	T										G	G	G		S	S	G	G	G				B		T	T	S		B		S	S											T	T	T	S	B	S	T	T		T	T	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		388	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		389	390	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions