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Job DescriptionP77774
Confidence100.00%DateThu Jan 5 12:32:43 GMT 2012
Rank6Aligned Residues378
% Identity17%Templated1kv9a2
SCOP info8-bladed beta-propeller Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.. .......40.........50.........60.........70.........80.....
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Query Sequence  GLLSVTLLSGCSLFNSEEDVVKM. . . . SPLPTVENQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALN
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Template Sequence  AAIRATEQAGGEWLSHGRTYAEQRFSPLKQIDASNVRSLGLAWYMDLDNTR. . . GLEATPLFHDGVIYTSMSWSRVIAVD
Template Known Secondary structure  TTT

S
B
BTTBSTT





SS
TTTGGG
S

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TTGGG
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   6...10.........20.........30.........40.........50...... ...60.........70.........80..
 
   86...90.........100........ .110.........120.........130.........140....... ..150...
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Query Sequence  ADDGKEIWSVSLAEKDGWFSKEP. ALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV. . . . . . . . . . . AGEALS
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Template Sequence  AASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVK
Template Known Secondary structure  TTT






GGGGGG
TT
S




BT
TTSTTT


S
TTSS
B

S

T
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   154.....160.........170.........180.........190. ........200.....
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Query Sequence  RPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS. . . . . . . . . . . . . . . . . . . . . . . . . . . . LSLRGESAPTTAFG
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Template Conservation       
                  

   
                          
        
       
 
   
Template Sequence  GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELD
Template Known Secondary structure  T

B
TTT

B
TTT

SS


TTS

SSTT

SS





S
TTTT
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   206...210.... .....220.........230.........240.........250....... ..260...
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Query Sequence  AAVVGGDNG. . . . . . . . . . . . . . . . . . . RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGV. . . VFALAY
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Template Sequence  LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPK
Template Known Secondary structure 


SS
STT



TTTT
TTT

SSTT

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S
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   264.....270.........280.....
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Query Sequence  NGNLTALDLRSGQIMWKRELGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEV
Template Known Secondary structure  TSTTT

SS


S
TTT


TTTT
SSS
SS
TT
SS
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TTTT
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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   286...290.........300.........310.........320.........330.........340.......
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Query Sequence  . . . . . . . . . . . . . . . . . . VNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLH
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Template Sequence  PGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMH
Template Known Secondary structure 



GGG



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GGG




GGG
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   403......410.........420.........430.........440.........450.........460.........470.........480..
 
   348.350.........360.........370... ......380. ........390.
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Query Sequence  WINVEDGRFVAQQKVDSSGFQTEPVA. . ADGKLLIQ. . . . . . . . . . . . . . . . . . . . . . AKDGTVYSIT
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Template Sequence  AYSADKGEALWQFEAQSG. IVAAPMTFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFA
Template Known Secondary structure  TTT


SS
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S

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GGGGSTT




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   483......490.........500 .........510.........520.........530.........540.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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