Job Description P77774 Confidence 94.99% Date Thu Jan 5 12:32:43 GMT 2012 Rank 137 Aligned Residues 333 % Identity 11% Template d1k3ia3 SCOP info 7-bladed beta-propeller Galactose oxidase, central domain Galactose oxidase, central domain Resolution 1.40

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	N	Q	F	T	P	T	T	A	W	S	T	S	V	G	S	G	I	G	N	F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	A	D	R	A	G	.	.	.	.	.	.	.	.	.	.	.	.	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																				.	.	.	.	.	.	.	.	.	.	.	.												.	.			.	.	.	.	.
Template Conservation																							.	.																																											.	.			.	.	.	.	.
Template Sequence		Y	T	A	P	Q	P	G	L	G	R	W	G	P	T	I	D	L	P	I	V	P	.	.	A	A	A	A	I	E	P	T	S	G	R	V	L	M	W	S	S	Y	R	N	D	A	F	G	G	S	P	G	G	I	T	L	T	S	S	W	D	P	S	T	G	I	.	.	V	S	.	.	.	.	.	D	R	T	V	T	V
Template Known Secondary structure							T	T	S										S	S			.	.	S						T	T	T	T											T	T	T		S				S									T	T	T			.	.	B		.	.	.	.	.
Template Predicted Secondary structure																							.	.																																											.	.			.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.						.	.	.	.	220	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	.	.	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		T	K	H	D	M	F	P	G	I	S	M	D	G	N	G	Q	I	V	V	T	G	G	N	D	A	K	K	T	S	L	Y	D	S	S	S	D	S	W	I	P	G	P	D	M	Q	V	A	R	G	Y	Q	S	S	A	T	M	S	D	G	R	V	F	T	I	G	G	S	W	S	G	G	V	F	E	K	N	G	E	V	Y
Template Known Secondary structure			S											T	T	S							S	S	S	T	T							G	G	G	T									S	S			S	S							T	T	S											S	S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	S	S	K	T	W	T	S	L	P	N	A	K	V	N	P	M	L	T	A	D	K	Q	G	L	Y	R	S	D	N	H	A	W	L	F	G	W	K	K	G	S	V	F	Q	A	G	P	S	T	A	M	N	W	Y	Y	T	S	G	S	G	D	V	K	S	A	G	K	R	Q	S	N	R	G	V	A	P	D	A	M
Template Known Secondary structure			T	T	T	T						T	T	S		S	G	G	G					T	T	G	G	G	T	T	T		S							G	G	G							S	S	S								S	T	T												T	T							B
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	.	N	G	N	L	V	V	G	D	S
Query Conservation																																																																								.
Alig confidence																																					.	.	.	.	.																															.
Template Conservation																																					.	.	.	.	.
Template Sequence		C	G	N	A	V	M	Y	D	A	V	K	G	K	I	L	T	F	G	G	S	P	D	Y	Q	D	S	D	A	T	T	N	A	H	I	I	.	.	.	.	.	T	L	G	E	P	G	T	S	P	N	T	V	F	A	S	N	G	L	Y	F	A	R	T	F	H	T	S	V	V	L	P	D	G	S	T	F	I	T	G	G
Template Known Secondary structure		T								T	T	T	T								B	S	S	S	S	S	S	B									.	.	.	.	.				S	T	T	S								T	T			S	S			B	S							T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.						.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		343	.	.													.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		E	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G	F	Q	T	E	P	V	A	A	.	.	D	G	K	L	L	I	Q	A	K	D
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		Q	R	R	G	I	P	F	E	D	S	T	P	V	F	T	P	E	I	Y	V	P	E	Q	D	T	F	Y	K	Q	N	P	N	S	I	V	R	V	Y	H	S	I	S	L	L	L	P	D	G	R	V	F	N	G	G	G	G
Template Known Secondary structure		B	S	B			T	T				S	B									G	G	G	T									S	S				T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions