Job Description P77774 Confidence 99.71% Date Thu Jan 5 12:32:43 GMT 2012 Rank 14 Aligned Residues 302 % Identity 8% Template d1jmxb_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Quinohemoprotein amine dehydrogenase B chain Resolution 1.90

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		A	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	.	E	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K
Query Conservation																																																													.
Alig confidence																																									.	.	.	.	.	.	.														.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		G	H	E	Y	M	I	V	T	N	Y	P	N	N	L	H	V	V	D	V	A	S	D	T	V	Y	K	S	C	V	M	P	D	K	F	G	P	G	T	A	.	.	.	.	.	.	.	M	M	A	P	D	N	R	T	A	Y	V	L	N	N	H	Y	G	D	I	Y	G	I	D	L	D	T	C	K	N	T	F	H	A	N
Template Known Secondary structure		T									T	T	T							T	T	T	T									S	S			S	S				.	.	.	.	.	.	.				T	T	S	S							T	T	T	T							T	T	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	S	V	P	G	E	V	G	R	S	M	Y	S	F	A	I	S	P	D	G	K	E	V	Y	A	T	V	N	P	T	Q	R	L	N	D	H	Y	V	V	K	P	P	R	L	E	V	F	S	T	A	D	G	L	E	A	K	P	V	R	T	F	P	M	P	R	Q	V	Y	L	M	R	A	A	D	D	G	S	L	Y
Template Known Secondary structure		S			S	T	T						S	S						T	T	S	S													S	S														G	G	G	G	G	G	B			S							S	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260										.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.
Query Sequence		G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	.	.	.	.	.	.	.	.	.	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R
Query Conservation																																																				.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	G	P	D	I	Y	K	M	D	V	K	T	G	K	Y	T	V	A	L	P	L	R	N	W	N	R	K	G	Y	S	A	P	D	V	L	Y	F	W	P	H	Q	S	P	R	H	E	F	S	M	L	Y	T	I	A	R	F	A	T	A	D	L	L	Y	G	Y	L	S	V	D	L	K	T	G	K	T	H	T	Q	E
Template Known Secondary structure				S	S	S						T	T	T									S	T	T				T	T	B				B										T	T																										T	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		282	.	.	.	.	.	.	.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		E	L	G	S	V	N	D	F	I	V	.	.	.	.	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		F	A	D	L	T	E	L	Y	F	T	G	L	R	S	P	K	D	P	N	Q	I	Y	G	V	L	N	R	L	A	K	Y	D	L	K	Q	R	K	L	I	K	A	A	N	L	D	H	T	Y	Y	C	V	A	F	D	K	K	G	D	K	L	Y	L	G	G	T	F	N	D	L	A	V	F	N	P	D	T	L	E	K	V
Template Known Secondary structure						S	S									S	S		T	T							S							T	T	T	T									S	S									S	S	S	S						S	B	S	S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Q	K	V	D	S	S	G	F	Q	T	E	P	V	A	A	D	G	K	L	L	I
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		K	N	I	K	L	P	G	G	D	M	S	T	T	.	.	.	.	T	P	Q	V	F	I
Template Known Secondary structure							S	S	S			B	T		.	.	.	.
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions