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Job DescriptionP77774
Confidence100.00%DateThu Jan 5 12:32:43 GMT 2012
Rank5Aligned Residues366
% Identity23%Templated1flga_
SCOP info8-bladed beta-propeller Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40. ........50.........60.........70.........80.........90.........100
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Query Sequence  FNSEEDVVKMSPLPTVENQ. . FTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEK
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Template Sequence  YGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQR. GQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLP
Template Known Secondary structure  TTSSTT





SS
TTTGGG


TT

S.





TTTTTSSS





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   21........30.........40.........50........ .60.........70.........80.........90.........
 
   101........110.........120.........130.........140.........150.........160......
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Query Sequence  DGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHT. . . . . . . . . . . . . .
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Template Sequence  DDIRP. CCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGD
Template Known Secondary structure  TT


.SS
S




TTTTTSSS


S
GGGT
B

S


TTT



B
G
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   100.... .....110.........120.........130.........140.........150.........160.........170........
 
   167..170.........180.........190 .........200.....
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Query Sequence  . . . SNGQLQALNEADGAVKWTVNLDMP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SLSLRGESAPTTAFG
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Template Conservation       
 
 
 
  

  

                                             
       
 
   
Template Sequence  EFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETN
Template Known Secondary structure  GG

B

TTT

SSTT
TTSS
TT
TTS
B
TTSTTSB
GGGGG
B



S

TTTT
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   179180.........190.........200.........210.........220.........230.........240.........250........
 
   206...210..... ....220.........230.........240.........250.......
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Query Sequence  AAVVGGDNGR. . . . . . . . . . . . . . . . . . . . . . . . VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGV. . . .
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Template Sequence  TIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKA
Template Known Secondary structure 

BSSS
GGGGS
TTS
STT


TT
S
TTT

SSTT

S








SSS
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   259260.........270.........280.........290.........300.........310.........320.........330........
 
   258.260.........270.........280.........290.
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Query Sequence  VFALAYNGNLTALDLRSGQIMWKRELGSVNDFIV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation 
      
 
  
    
                                                 
   
       
Template Sequence  TAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMA
Template Known Secondary structure 
TTSTTT

SSS


S
TTT


TT
S




TT
SS


SS
TT
SS
SS

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   339340.........350.........360.........370.........380.........390.........400.........410........
 
   292.......300.........310.........320.........330.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNG
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Template Conservation                              
                  
 
 
 
  

   
             
 


Template Sequence  YSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGN
Template Known Secondary structure 
TTT








TTS



S
SS
S
TTT

SS


S

TTT
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   419420.........430.........440.........450.........460.........470.........480.........490........
 
   336...340.........350.........360.........370... ......380..... ....390
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Query Sequence  NLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA. . ADGKLLIQAKDG. . . . . . . . . . . . . . . . . . . . . . . TVYSI
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Template Sequence  LVFTGTGDGYFKAFDAKSGKELWKFQTGSG. IVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVF
Template Known Secondary structure 
TTSTTT


SS
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S

TT


S
TTT




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   499500.........510.........520........ .530.........540.........550.........560.........570.......
 
   391
Predicted Secondary structure 
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Query Sequence  T
Query Conservation   
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Template Conservation   
Template Sequence  K
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   578
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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