Job Description P77774 Confidence 40.34% Date Thu Jan 5 12:32:43 GMT 2012 Rank 164 Aligned Residues 218 % Identity 9% Template c3soqA_ PDB info PDB header:protein binding/antagonist Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6; PDBTitle: the structure of the first ywtd beta propeller domain of lrp6 in2 complex with a dkk1 peptide Resolution 1.90 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	Y	A	N	R	R	D	L	R	L	V	D	A	T	N	G	K	E	N	A	T	I	V	V	G	G	L	E	D	A	A	A	V	D	F	V	F	S	H	G	L	I	Y	W	S	D	V	S	E	E	A	I	K	R	T	E	F	N	K	T	E	S	V	Q	N	V	V	V	S	G	L	L	S	P	D	G	L	A	C
Template Known Secondary structure															G	G	G	T	T	S																			G	G	G	T							T	T	T	T							T	T	S	T	T											S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		254			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure			.	.																																						.	.	.	.	.	.
Query SS confidence			.	.																																						.	.	.	.	.	.
Query Sequence		V	.	.	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	.	.	.	.	.	.	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R
Query Conservation			.	.																																						.	.	.	.	.	.
Alig confidence			.	.																																						.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	L	G	E	K	L	Y	W	T	D	S	E	T	N	R	I	E	V	S	N	L	D	G	S	L	R	K	V	L	F	W	Q	E	L	D	Q	P	R	A	I	A	L	D	P	S	S	G	F	M	Y	W	T	D	W	G	E	V	P	K	I	E	R	A	G	M	D	G	S	S	R	F	I	I	I	N	S	E	I	Y
Template Known Secondary structure			T	T	T	T							T	T	T	T							T	T	S		S							S	S		S	S								T	T	T	T								S	S	S								T	T	S		S							S	S		S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		326	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure										.	.									.																																										.
Query SS confidence										.	.									.																																										.
Query Sequence		L	L	T	S	P	V	L	Y	.	.	N	G	N	L	V	V	G	D	.	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G	F	Q	T	E	P	V	A	A	D	G	K	L	L	I	Q	A	.	K	D	G	T	V	Y	S	I	T	R
Query Conservation										.	.									.																																										.
Alig confidence										.	.									.											.																															.
Template Conservation																															.
Template Sequence		W	P	N	G	L	T	L	D	Y	E	E	Q	K	L	Y	W	A	D	A	K	L	N	F	I	H	K	S	N	L	.	D	G	T	N	R	Q	A	V	V	K	G	S	L	P	H	P	F	A	L	T	L	F	E	D	I	L	Y	W	T	D	W	S	T	H	S	I	L	A	C	N	K
Template Known Secondary structure										T	T	T	T							T	T	T	T							T	.	T	S		S							S			S									T	T							T	T	T	T							T
Template Predicted Secondary structure																															.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions