Job Description P77774 Confidence 98.70% Date Thu Jan 5 12:32:43 GMT 2012 Rank 73 Aligned Residues 285 % Identity 11% Template c3ow8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 61; PDBTitle: crystal structure of the wd repeat-containing protein 61 Resolution 2.30 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	V	G	S	G	I	G	N	F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A
Query Conservation
Alig confidence																		.	.	.																																									.	.	.	.	.	.
Template Conservation																		.	.	.																																									.	.	.	.	.	.
Template Sequence		F	K	Q	E	Q	A	H	D	D	A	I	W	S	V	A	W	.	.	.	G	E	T	V	V	T	G	S	L	D	D	L	V	K	V	W	K	W	R	D	E	R	L	D	L	Q	W	S	L	E	G	H	Q	L	G	V	V	S	V	D	.	.	.	.	.	.	I	S	H	T	L	P	I	A	A	S	S	S	L	D	A
Template Known Secondary structure					T	T	S	S	S	S								.	.	.									T	T	S									T	T												S	S							.	.	.	.	.	.			S	S	S	S							T	T	S
Template Predicted Secondary structure																		.	.	.																																									.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	I	R	L	W	D	L	E	N	G	K	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	I	D	A	G	P	V	D	A	W	T	L	A	F	S	P	D	S	Q	Y	L	A	T
Template Known Secondary structure								T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T									T	T	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.																																												100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F
Query Conservation
Alig confidence																																																																			.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		G	T	H	V	G	K	V	N	I	F	G	V	E	S	G	K	K	E	Y	S	L	D	T	R	G	K	F	I	L	S	I	A	Y	S	P	D	G	K	Y	L	A	S	G	A	I	D	G	I	I	N	I	F	D	I	A	T	G	K	L	L	H	T	L	E	G	.	.	.	.	.	H	A	M	P	I	R	S	L	T	F
Template Known Secondary structure				T	T	S							T	T	T		S								S	S	S									T	T	S	S							T	T	S							T	T	T	T									.	.	.	.	.		S	S
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	.	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G	F	Q
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		S	P	D	S	Q	L	L	V	T	A	S	D	D	G	Y	I	K	I	Y	D	V	Q	H	A	N	L	A	G	T	L	S	G	H	A	S	W	V	L	N	V	A	F	C	P	D	D	T	H	F	V	S	S	S	S	D	K	S	V	K	V	W	D	V	G	T	R	T	C	V	H	T	F	F	D	H	Q	D	Q	V	W
Template Known Secondary structure			T	T	S								T	T	S							T	T	T											S	S									T	T	S	S							T	T	S							T	T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		369	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	E	P	V	A	A	D	G	K	.	L	L	I	Q	A	K	D	G	T	V	Y	S	I	T
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		G	V	K	Y	N	G	N	G	S	K	I	V	S	V	G	D	D	Q	E	I	H	I	Y	D
Template Known Secondary structure							T	T	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions