Job Description P77774 Confidence 99.08% Date Thu Jan 5 12:32:43 GMT 2012 Rank 46 Aligned Residues 188 % Identity 13% Template c3lrvA_ PDB info PDB header:splicing Chain: A: PDB Molecule:pre-mrna-splicing factor 19; PDBTitle: the prp19 wd40 domain contains a conserved protein interaction region2 essential for its function. Resolution 2.60 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	T	T	A	F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M
Query Conservation
Alig confidence																																											.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		S	M	Y	Y	D	K	W	V	C	M	C	R	C	E	D	G	A	L	H	F	T	Q	L	K	D	S	K	T	I	T	T	I	T	T	P	N	P	R	T	G	G	.	.	.	.	.	E	H	P	A	I	I	S	R	G	P	C	N	R	L	L	L	L	Y	P	G	N	Q	I	T	I	L	D	S	K	T	N	K	V	L
Template Known Secondary structure		S	S	S												T	T								S	S	S	S												T	T		.	.	.	.	.				S						S	T	T							T	T	T							T	T	T
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.						.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																.	.	.	.																																										.	.
Query SS confidence																.	.	.	.																																										.	.
Query Sequence		W	K	R	E	L	G	S	V	N	D	F	I	V	D	.	.	.	.	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	.	.	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E
Query Conservation																.	.	.	.																																										.	.
Alig confidence																.	.	.	.																																										.	.
Template Conservation
Template Sequence		R	E	I	E	V	D	S	A	N	E	I	I	Y	M	Y	G	H	N	T	E	Y	F	I	W	A	D	N	R	G	T	I	G	F	Q	S	Y	E	D	D	S	Q	Y	I	V	H	S	A	K	S	D	V	E	Y	S	S	G	V	L	H	K	D	S	L	L	L	A	L	Y	S	P	D	G	I	L	D	V	Y	N	L	S
Template Known Secondary structure									S	S																		T	T								S	S	S	S										S	S										T	T	S								T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		D	G	R	F	V	A	Q	Q	.	.	K	V	D	S	S	G	F	Q	T	E	P	V	A	A	D	G	K	L	L	I	Q	A	K	D	G	T	V	Y	S	I	T
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		S	P	D	Q	A	S	S	R	F	P	V	D	E	E	A	K	I	K	E	V	K	F	A	D	N	G	Y	W	M	V	V	E	C	D	Q	T	V	V	C	F	D
Template Known Secondary structure			T	T	S									T	T	S									T	T	S	S							S	S	B
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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