Job Description P77774 Confidence 99.93% Date Thu Jan 5 12:32:43 GMT 2012 Rank 11 Aligned Residues 302 % Identity 15% Template c3hxjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyrrolo-quinoline quinone; PDBTitle: crystal structure of pyrrolo-quinoline quinone (pqq_dh) from2 methanococcus maripaludis, northeast structural genomics consortium3 target mrr86 Resolution 2.00 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		W	S	T	S	V	G	S	G	I	G	N	F	Y	S	N	L	H	P	A	L	A	.	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S
Query Conservation																							.
Alig confidence											.	.	.	.	.								.																			.										.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																											.										.	.	.	.	.	.	.	.	.	.
Template Sequence		W	E	F	L	I	G	N	S	I	.	.	.	.	.	D	S	S	P	I	L	A	K	N	G	T	I	Y	L	G	S	S	N	K	N	L	Y	A	I	N	T	.	D	G	S	V	K	W	F	F	K	.	.	.	.	.	.	.	.	.	.	S	G	E	I	I	E	C	R	P	S	I	G	K	D	G	T	I	Y	F	G
Template Known Secondary structure			T	T	T	S					.	.	.	.	.								T	T	S					S	S	T	T	T	T	T					T	.	T	S					S	S		.	.	.	.	.	.	.	.	.	.	G	G	G									T	T	T	T					S
Template Predicted Secondary structure											.	.	.	.	.																											.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A
Query Conservation
Alig confidence					.																							.	.	.	.	.	.																																.	.	.	.	.
Template Conservation					.																							.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		S	D	K	.	V	Y	A	I	N	P	D	G	T	E	K	W	R	F	D	T	S	D	F	T	I	F	.	.	.	.	.	.	E	D	I	L	Y	V	T	S	X	D	G	H	L	Y	A	I	N	T	D	G	T	E	K	W	R	F	K	T	K	K	A	.	.	.	.	.	I	Y	A	T	P	I	V	S	E	D	G	T
Template Known Secondary structure		S			.								G	G	G	G	G	G	S									.	.	.	.	.	.	T	T							T	T	S							T	T	S									S	S		.	.	.	.	.			S						T	T	S
Template Predicted Secondary structure					.																							.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		77	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	V	G	S	N	D	N	Y	L	Y	A	I	N	P	D	G	T	E	K	W	R	F	K	T	N	D	A	I	T	S	A	.	.	.	.	.	.	.	.	.	.	.	.	A	S	I	G	K	D	G	T	I	Y	F	G	S	D	K	V	Y	A	I	N	P	D	G	T	E	K	W	N	F	Y	A	G	Y	W	T	V
Template Known Secondary structure							T	T	S							T	T	S									S	S				S		.	.	.	.	.	.	.	.	.	.	.	.					T	T							S	S	S						T	T	S									S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.													.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G
Query Conservation
Alig confidence																																																																			.
Template Conservation																																																																			.
Template Sequence		T	R	P	A	I	S	E	D	G	T	I	Y	V	T	S	L	D	G	H	L	Y	A	I	N	P	D	G	T	E	K	W	R	F	K	T	G	K	R	I	E	S	S	P	V	I	G	N	T	D	T	I	Y	F	G	S	Y	D	G	H	L	Y	A	I	N	P	.	D	G	T	E	K	W	N	F	E	T	G	S	W	I
Template Known Secondary structure		S						T	T	S							T	T	T							T	T	S									S	S				S						T	T	S							T	T								T	.	T	S									S	S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	T	E	P	V	A	A	D	G	K	L	L	I	Q	A	K	D	G	T	V	Y	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	T	P	V	I	D	E	N	G	T	I	Y	F	G	T	R	N	G	K	F	Y	A	L
Template Known Secondary structure			S						T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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