Job Description P77774 Confidence 64.30% Date Thu Jan 5 12:32:43 GMT 2012 Rank 156 Aligned Residues 261 % Identity 10% Template c3hrpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics protein of unknown function2 (np_812590.1) from bacteroides thetaiotaomicron vpi-5482 at 1.70 a3 resolution Resolution 1.70 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																																															.	.	.
Template Conservation
Template Sequence		A	K	F	K	Y	X	W	G	I	A	A	V	G	N	N	T	V	L	A	Y	Q	R	D	D	P	R	V	R	L	I	S	V	D	D	N	K	V	T	T	V	H	P	G	F	K	G	G	K	P	A	V	T	K	D	K	Q	R	V	Y	S	I	G	W	E	G	T	H	T	V	Y	V	Y	X	K	A	S	G	W	A	P
Template Known Secondary structure														S	T	T							T	T	T	T							T	T	T	T								T			B		B					T	T	S	S						B	S	S	T	T								G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	I	G	Q	L	G	S	T	F	S	G	K	I	G	A	V	A	L	D	E	T	E	E	W	L	Y	F	V	D	S	N	K	N	F	G	R	F	N	V	K	T	Q	E	V	T	L	I	K	Q	L	E	L	S	G	S	L	G	T	N	.	.	.	.	.	.	.	.	.	.	.	.	P	G	P	Y	L	I	Y	Y
Template Known Secondary structure									T	T	S		S				B					T	T	S	S							T	T								T	T	T													S					S	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.													.	290	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	D	S	N	F	Y	X	S	D	Q	N	L	S	S	V	Y	K	I	T	P	D	G	E	C	E	W	F	C	G	S	A	T	Q	K	T	V	Q	D	G	L	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	F	A	Q	P	N	G	X	T	V	D	E	D	G	N	F	Y	I	V	D
Template Known Secondary structure		T	T	T	T							T	T	T	T							T	T										T	T			S		B				G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G		B		S	S								T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.																340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
				342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.															.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		.	.	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	E	P	V	A	A	D	G	K	L	L	I	Q	.	A	K	D	G	T	V	Y	S	I	T	R
Query Conservation		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		G	F	K	G	Y	C	L	R	K	L	D	I	L	D	G	Y	V	S	T	V	A	G	Q	V	D	V	A	S	Q	I	D	G	T	P	L	E	A	T	F	N	Y	P	Y	D	I	C	Y	D	G	E	G	G	Y	W	I	A	E	A	W	G	K	A	I	R	K	Y	A	V
Template Known Secondary structure		T	T	T	T								T	T	T	T									T	T		B	S				B	S	T	T	T			B	S	S								S	S	S							S	T	T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions