Job Description P77774 Confidence 99.12% Date Thu Jan 5 12:32:43 GMT 2012 Rank 43 Aligned Residues 290 % Identity 9% Template c3dsmA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bacuni_02894; PDBTitle: crystal structure of the surface layer protein bacuni_02894 from2 bacteroides uniformis, northeast structural genomics consortium3 target btr193d. Resolution 1.90 Å

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		72	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																																				.
Query SS confidence								.	.	.	.	.	.																																																				.
Query Sequence		V	Y	A	A	D	R	.	.	.	.	.	.	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	.	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q
Query Conservation								.	.	.	.	.	.																																																				.
Alig confidence								.	.	.	.	.	.																												.	.	.	.																					.
Template Conservation																																									.	.	.	.
Template Sequence		L	F	I	T	N	E	G	N	F	Q	Y	S	N	A	T	L	S	Y	Y	D	P	A	T	C	E	V	E	N	E	V	F	Y	R	A	N	G	F	K	L	.	.	.	.	G	D	V	A	Q	S	X	V	I	R	D	G	I	G	W	I	V	V	N	N	S	H	V	I	F	A	I	D	I	N	T	F	K	E	V	G	R
Template Known Secondary structure										T	T	S			B							T	T	T	T					S							S	S			.	.	.	.	B	S									T	T							G	G	G	T							T	T	T
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																	.																																																				.	.
Query SS confidence																	.																																																				.	.
Query Sequence		T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	.	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	.	.	G	D	N	G	R	V	S	A	V	L	M
Query Conservation																	.																																																				.	.
Alig confidence																	.																																																				.	.
Template Conservation
Template Sequence		I	T	G	F	T	S	P	R	Y	I	H	F	L	S	D	E	K	A	Y	V	T	Q	I	W	D	Y	R	I	F	I	I	N	P	K	T	Y	E	I	T	G	Y	I	E	C	P	D	X	D	X	E	S	G	S	T	E	Q	X	V	Q	Y	G	K	Y	V	Y	V	N	C	W	S	Y	Q	N	R	I	L	K	I	D	T
Template Known Secondary structure						S	S									T	T							B	S		S							T	T	T	T									T	T			T	T	T		B								T	T								T	T									T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.						.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	.	.	.	.	.	N	D	F	I	V	D	G	N	R	I
Query Conservation																																																																			.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.
Template Conservation
Template Sequence		E	T	D	K	V	V	D	E	L	T	I	G	I	Q	P	T	S	L	V	X	D	K	Y	N	K	X	W	T	I	T	D	G	G	Y	E	G	S	P	Y	G	Y	E	A	P	S	L	Y	R	I	D	A	E	T	F	T	V	E	K	Q	F	K	F	K	L	G	D	W	P	S	E	V	Q	L	N	G	T	R	D	T	L
Template Known Secondary structure		T	T	T									S	S		B							T	T	S						B			B		T	T		S	S		B										T	T	T	T										T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		297	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure								.																																								.	.	.	.	.
Query SS confidence								.																																								.	.	.	.	.
Query Sequence		Y	L	V	D	Q	N	.	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	.	.	.	.	.	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G
Query Conservation								.																																								.	.	.	.	.
Alig confidence								.																																								.	.	.	.	.										.
Template Conservation																																																														.
Template Sequence		Y	W	I	N	N	D	I	W	R	X	P	V	E	A	D	R	V	P	V	R	P	F	L	E	F	R	D	T	K	Y	Y	G	L	T	V	N	P	N	N	G	E	V	Y	V	A	D	A	I	D	Y	Q	Q	Q	G	I	V	Y	R	Y	S	.	P	Q	G	K	L	I	D	E	F	Y	V	G	I	I	P
Template Known Secondary structure					S	S	S						T	T		S	S			S	S		S	B				S	S									T	T	T									T	T	S	S	S									.	T	T												S
Template Predicted Secondary structure																																																														.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions