Job Description P77774 Confidence 99.65% Date Thu Jan 5 12:32:43 GMT 2012 Rank 16 Aligned Residues 291 % Identity 13% Template c3dm0A_ PDB info PDB header:sugar binding protein,signaling protein Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with PDBTitle: maltose binding protein fusion with rack1 from a. thaliana Resolution 2.40 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		T	S	V	G	S	G	I	G	N	F	Y	S	N	L	H	P	A	L	A	.	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K
Query Conservation																					.
Alig confidence																					.																																.	.	.
Template Conservation																																																					.	.	.
Template Sequence		K	G	T	M	R	A	H	T	D	M	V	T	A	I	A	T	P	I	D	N	A	D	I	I	V	S	A	S	R	D	K	S	I	I	L	W	K	L	T	K	D	D	K	A	Y	G	V	A	Q	R	R	.	.	.	L	T	G	H	S	H	F	V	E	D	V	V	L	S	S	D	G	Q	F	A	L	S	G	S	W	D
Template Known Secondary structure									S	S									T	T			S							T	T	S										S	T	T		S							.	.	.					S	S									T	T	S	S							T	T
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		1008	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.				.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	L	R	L	W	D	L	A	A	G	V	S	T	R	R	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	T	K	D	V	L	S	V	A	F	S	L	D	N	R	Q	I	V
Template Known Secondary structure		S							T	T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S									T	T	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1085	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.																																												.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		S	A	S	R	D	R	T	I	K	L	W	N	T	L	G	E	C	K	Y	T	I	S	E	G	G	E	G	H	R	D	W	V	S	C	V	R	F	S	P	N	T	.	.	.	.	L	Q	P	T	I	V	S	A	S	W	D	K	T	V	K	V	W	N	L	S	N	C	K	L	R	S	T	L	A	G	H	T	G	Y	V
Template Known Secondary structure					T	T	S							T	T	S								S	S	T	T	S		S	S									S		S	.	.	.	.	S	S								T	T	S							T	T	T											S	S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		1122	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.					.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.
		289	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		F	I	V	D	.	.	.	.	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																													.
Template Conservation																																						.
Template Sequence		S	T	V	A	V	S	P	D	G	S	L	C	A	S	G	G	K	D	G	V	V	L	L	W	D	L	A	E	G	K	K	L	Y	S	L	E	.	A	N	S	V	I	H	A	L	C	F	S	P	N	R	Y	W	L	C	A	A	T	E	H	G	I	K	I	W	D	L	E	S	K	S	I	V	E	D	L	K	V	D	L
Template Known Secondary structure								T	T	S	S							T	T	S	B						T	T	T	T							B	.		S	S									S	S	S	S							T	T							T	T	T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		1198	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.		.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.
		365				.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure			.	.	.													.
Query SS confidence			.	.	.													.
Query Sequence		S	.	.	.	G	F	Q	T	E	P	V	A	A	D	G	K	.	L	L	I	Q	A	K	D	G	T	V	Y	S	I	T
Query Conservation			.	.	.													.
Alig confidence			.	.	.													.
Template Conservation
Template Sequence		K	K	V	I	Y	C	T	S	L	N	W	S	A	D	G	S	T	L	F	S	G	Y	T	D	G	V	I	R	V	W	G
Template Known Secondary structure														T	T	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		1277	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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