Job Description P77774 Confidence 99.44% Date Thu Jan 5 12:32:43 GMT 2012 Rank 31 Aligned Residues 313 % Identity 10% Template c3c75J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin Resolution 2.50 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		S	G	I	G	N	F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	.	.	.	.	.	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		G	E	A	D	E	P	V	I	L	E	A	P	A	P	D	A	R	R	V	Y	I	Q	D	P	A	H	F	A	A	I	T	Q	Q	F	V	I	D	G	S	T	G	R	I	L	G	M	T	D	G	G	F	L	P	H	P	V	A	A	E	D	G	S	F	F	A	Q	A	S	T	V	F	E	R	I	A	R	G	K	R	T
Template Known Secondary structure		S															T	T								T	T	T		S	S								T	T	T	T										S	S							T	T	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	.	.	.	.	.	S	L	R	G	E	S	A	P	T	T	A
Query Conservation																																																																		.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.
Template Conservation
Template Sequence		D	Y	V	E	V	F	D	P	V	T	F	L	P	I	A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	Q	W	M	N	A	L	T	P	D	N	K	N	L	L	F	Y	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	K	T	F	D	R	M	L	D	V	P	D	C	Y	H	I	F	P	A	S
Template Known Secondary structure									T	T	T										T	T							S			G	G	G	S				T	T	S	S								S	S	S								T	T	T	T										S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.						.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																											.	.	.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	.	.	.	.	.	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	V	F	Y	M	N	C	R	D	G	S	L	A	R	V	D	F	A	D	G	E	T	K	V	T	N	T	E	V	F	H	T	E	D	E	L	L	I	N	H	P	A	F	S	L	R	S	G	R	L	V	W	P	T	Y	T	G	K	I	F	Q	A	D	L	T	A	E	G	A	T	F	R	A	P	I	E	A	L	T
Template Known Secondary structure		T	T							T	T	S	S								T	T											S		T	T	S		B		S						T	T	T							B	T	T	S									S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
											271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																																		.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																																		.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	.	.	N	L	V	V
Query Conservation		.	.	.	.	.	.	.	.	.																																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																																		.	.
Template Conservation
Template Sequence		E	A	E	R	A	D	D	W	R	P	G	G	W	Q	Q	T	A	Y	H	R	Q	S	D	R	I	Y	L	L	V	D	Q	R	D	E	W	K	H	K	A	A	S	R	F	V	V	V	L	N	A	E	T	G	E	R	I	N	K	I	E	L	G	H	E	I	D	S	I	N	V	S	Q	D	A	E	P	L	L	Y	A	L
Template Known Secondary structure		T	T	T	G	G	G	T					S	S	S						T	T	T	T											T	T		T	T	S										T	T	T																					S	S	S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	G	T	Q	T	L	H	I	Y	D	A	A	T	G	E	E	L	R	S	V	D	Q	L	G	R	G
Template Known Secondary structure			T	T	T	T							T	T	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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