Job Description P77774 Confidence 96.82% Date Thu Jan 5 12:32:43 GMT 2012 Rank 121 Aligned Residues 261 % Identity 12% Template c2z2pA_ PDB info PDB header:lyase/antibiotic Chain: A: PDB Molecule:virginiamycin b lyase; PDBTitle: crystal structure of catalytically inactive h270a virginiamycin b2 lyase from staphylococcus aureus with quinupristin Resolution 2.80 Å

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		69	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		D	N	V	V	Y	A	A	.	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V
Query Conservation									.
Alig confidence									.																				.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Sequence		K	G	K	V	W	I	T	Q	H	K	A	N	M	I	S	C	I	N	L	D	G	K	I	T	E	Y	E	.	.	.	.	.	.	.	.	.	L	P	N	K	G	A	K	V	M	C	L	T	I	S	S	D	G	E	V	W	F	T	E	N	A	A	N	K	I	G	R	I	T	K	K	G	I	I	K	.	.	.	.	.
Template Known Secondary structure		S	S							T	T	T	T							T	T	S							.	.	.	.	.	.	.	.	.		S	S	S											T	T	S							T	T	T	T							T	T	S				.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.										.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	T	L	P	N	P	D	S	A	P	Y	G	I	T	E	G	P	N	G	D	I	W	F	T	E	M	N	G	N	R	I	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	T	T										T	T	S							T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																	91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	.	.	.	.	.	D	G	N	R	I	Y	L	V	D	Q	N
Query Conservation																																																																		.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.
Template Conservation
Template Sequence		R	I	T	D	D	G	K	I	R	E	Y	E	L	P	N	K	G	S	Y	P	S	F	I	T	L	G	S	D	N	A	L	W	F	T	E	N	Q	N	N	A	I	G	R	I	T	E	S	G	D	I	T	E	F	K	I	P	T	P	A	S	G	P	V	G	I	T	K	G	N	D	D	A	L	W	F	V	E	I	I	G
Template Known Secondary structure					S	S			B						S	S	T	T										T	T	S	S						T	T	T	T							T	T									S	S	T	T										T	T	S	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	.	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G	F	Q	T	E	P	V	A	A	D	G	K	L	L	I	Q
Query Conservation																																										.
Alig confidence																																										.										.
Template Conservation																																																				.
Template Sequence		N	K	I	G	R	I	T	T	S	G	E	I	T	E	F	K	I	P	T	P	N	A	R	P	H	A	I	T	A	G	A	G	I	D	L	W	F	T	E	W	G	A	N	K	I	G	R	L	T	S	.	N	N	I	I	E	E	Y	P	I	Q	I	K	S	A	E	P	A	G	I	C	F	D	G	E	T	I	W	F	A
Template Known Secondary structure		T							S	S									S	S	T	T										S	T	T							T	T	T	T							G	.	G	G									S	T	T										S	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		382	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	D	G	T	V	Y	S	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	C	D	K	I	G	K	L	T
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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