Job Description P77774 Confidence 77.72% Date Thu Jan 5 12:32:43 GMT 2012 Rank 150 Aligned Residues 294 % Identity 7% Template c2xbgA_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:ycf48-like protein; PDBTitle: crystal structure of ycf48 from thermosynechococcus2 elongatus Resolution 1.50 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	T	S	V	G	S	G	I	G	N	F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E
Query Conservation
Alig confidence						.	.																																	.	.										.	.	.	.	.
Template Conservation						.	.																																	.	.										.	.	.	.	.
Template Sequence		W	E	A	I	.	.	Q	L	P	T	T	A	T	I	L	D	M	S	F	I	D	R	H	H	G	W	L	V	G	V	N	A	T	L	M	E	T	R	.	.	D	G	G	Q	T	W	E	P	R	.	.	.	.	.	T	L	V	L	D	H	S	D	Y	R	F	N	S	V	S	F	Q	G	N	E	G	W	I	V	G	E
Template Known Secondary structure						.	.			S		S	S								S	S	S	S							T	T	T						S	.	.	S	T	T	S	S					.	.	.	.	.					S													T	T
Template Predicted Secondary structure						.	.																																	.	.										.	.	.	.	.
Template SS confidence
		47	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	I	M	L	H	T	T	D	G	G	Q	S	W	S	Q	I	P	L	D	P	K	L	P	G	S	P	R	L	I	K	A	L	G	N	G	S	A	E	M	I	T	N	V	G	A	I	Y	R	T	K	D	S	G	K	N	W	Q	A	L	V	Q	E	A	I	G	V	M	R	N	L	N	R	S	P	S	G	E	Y	V
Template Known Secondary structure		T	T						S	S	T	T	S	S								T	T		S	S										T	T							T	T							S	S	T	T	S	S							S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N
Query Conservation
Alig confidence																																																													.	.
Template Conservation																																																													.	.
Template Sequence		A	V	S	S	R	G	S	F	Y	S	T	W	E	P	G	Q	T	A	W	E	P	H	N	R	T	T	S	R	R	L	H	N	M	G	F	T	P	D	G	R	L	W	M	I	V	N	G	G	K	I	A	F	S	D	P	D	N	S	E	.	.	N	W	G	E	L	L	S	P	L	R	R	N	S	V	G	F	L	D	L
Template Known Secondary structure					T	T	S	S							T	T		S	S								S	S	S									T	T	S							T	T	T							T	T				.	.						B		T	T	S	S			S
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	.	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		A	Y	R	T	P	N	E	V	W	L	A	G	G	A	G	A	L	L	C	S	Q	D	G	G	Q	T	W	Q	Q	D	V	D	V	K	K	V	P	S	N	F	Y	K	I	L	F	F	S	P	D	Q	G	F	I	L	G	Q	K	G	I	L	L	R	Y	V	T	D
Template Known Secondary structure				S	S	S	S							S	T	T						S	S	T	T	S	S					G	G	G	T	T	S	S	S										T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions