Job Description P77774 Confidence 43.80% Date Thu Jan 5 12:32:43 GMT 2012 Rank 162 Aligned Residues 272 % Identity 14% Template c2vz1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:galactose oxidase; PDBTitle: premat-galactose oxidase Resolution 1.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130													.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	.	.	.	.	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		A	A	A	A	I	E	P	T	S	G	R	V	L	M	W	S	S	Y	R	N	D	A	F	G	G	S	P	G	G	I	T	L	T	S	S	W	D	P	S	T	G	I	V	S	D	R	T	V	T	V	T	K	H	D	M	F	C	P	G	I	S	M	D	G	N	G	Q	I	V	V	T	G	G	N	D	A	K	K	T	S
Template Known Secondary structure		S						T	T	T	T							S	S	S	S	S			T	T			S	S									T	T	T										T	T					S	S							T	T	S							S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																																				.	.
Query SS confidence																																							.	.	.	.	.	.																																				.	.
Query Sequence		N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	.	.	.	.	.	.	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	.	.
Query Conservation																																							.	.	.	.	.	.																																				.	.
Alig confidence																																							.	.	.	.	.	.															.	.																				.	.
Template Conservation																																																											.	.
Template Sequence		L	Y	D	S	S	S	D	S	W	I	P	G	P	D	M	Q	V	A	R	G	Y	Q	S	S	A	T	M	S	D	G	R	V	F	T	I	G	G	S	W	S	G	G	V	F	E	K	N	G	E	V	Y	S	P	S	S	K	T	.	.	W	T	S	L	P	N	A	K	V	N	P	M	L	T	A	D	K	Q	G	L	Y
Template Known Secondary structure					T	T	T	T									S	S			B	S							T	T	S								B	T	S	S		S	S									T	T	T	T		.	.					T	T	S		S	G	G	G					T	T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
						247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.														.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure		.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Query Sequence		.	.	.	.	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	R	I	Y	L	V	D	Q	N	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	D	N	H	A	W	L	F	G	W	K	K	G	S	V	F	Q	A	G	P	S	T	A	M	N	W	Y	Y	T	S	G	S	G	D	V	K	S	A	G	K	R	Q	S	N	R	G	V	A	P	D	A	M	C	G	N	A	V	M	Y	D	A	V	K	G	K	I	L	T	F	G	G	S	P	D	Y	Q	D	S	D
Template Known Secondary structure				T	S	S							G	G	G							S	S	S								S	T	T												T	T							B	T								T	T	T	T								B	S	S	S	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
							303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.													.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360
Predicted Secondary structure		.	.	.	.	.																		.	.															.												.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence		.	.	.	.	.																		.	.															.												.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		.	.	.	.	.	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	.	.	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	.	N	G	N	L	V	V	G	D	S	E	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	H	W	I	N	V	E	D	G	R	.	.	F	V	A	Q	Q
Query Conservation		.	.	.	.	.																		.	.															.												.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence		.	.	.	.	.																		.	.															.												.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		A	T	T	N	A	H	I	I	T	L	G	E	P	G	T	S	P	N	T	V	F	A	S	N	G	L	Y	F	A	R	T	F	H	T	S	V	V	L	P	D	G	S	T	F	I	T	G	G	Q	R	R	G	I	P	F	E	D	S	T	P	V	F	T	P	E	I	Y	V	P	E	Q	D	T	F	Y	K	Q	N	P	N
Template Known Secondary structure													S	T	T	S								T	T			S	S			B	S							T	T	S								B	S	B			T	T				S	B									G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	D	S	S	G	F	Q	T	E	P	V	A	A	D	G	K	L	L	I	Q	A	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	V	R	V	Y	H	S	I	S	L	L	L	P	D	G	R	V	F	N	G	G	G	G
Template Known Secondary structure		S	S				T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions