Job Description P77774 Confidence 97.17% Date Thu Jan 5 12:32:43 GMT 2012 Rank 115 Aligned Residues 209 % Identity 9% Template c2vduB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(7)-)-methyltransferase- PDBTitle: structure of trm8-trm82, the yeast trna m7g methylation2 complex Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																				.	.	.																											.
Query SS confidence																																				.	.	.																											.
Query Sequence		G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	.	.	.	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	.	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G
Query Conservation																																				.	.	.																											.
Alig confidence																																				.	.	.																											.
Template Conservation
Template Sequence		H	P	L	Q	N	L	L	T	S	R	D	G	S	L	V	F	A	I	I	K	N	C	I	L	S	F	K	Y	Q	S	P	N	H	W	E	F	A	G	K	W	S	D	D	F	P	I	Y	S	Y	I	R	N	L	R	L	T	S	D	E	S	R	L	I	A	C	A	D	S	D	K	S	L	L	V	F	D	V	D	K	T
Template Known Secondary structure											S	S	S	S							T	T									T	T	T																									T	T	S	S							G	G	G	T									S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.							.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.												.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.												.	.	.	.
Query Sequence		Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	.	.	.	.	.	.	G	S	V	N	D	F	I	V	D	G	N	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.												.	.	.	.
Alig confidence																					.	.	.	.	.																																				.	.	.	.	.	.												.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		S	K	N	V	L	K	L	R	K	R	F	C	F	S	K	R	P	N	A	.	.	.	.	.	I	S	I	A	E	D	D	T	T	V	I	I	A	D	K	F	G	D	V	Y	S	I	D	I	N	S	I	P	E	E	K	F	T	Q	E	P	I	L	G	H	V	S	M	L	T	D	V	H	L	I	K	D	S	D	G	H
Template Known Secondary structure		S	S	S											S	S					.	.	.	.	.					T	T	S	S							T	T	S							T	T	S				S	S						S				S	S											T	T	S
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
			295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure		.																																										.
Query SS confidence		.																																										.
Query Sequence		.	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	.	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V
Query Conservation		.																																										.
Alig confidence		.																																										.
Template Conservation
Template Sequence		Q	F	I	I	T	S	D	R	D	E	H	I	K	I	S	H	Y	P	Q	C	F	I	V	D	K	W	L	F	G	H	K	H	F	V	S	S	I	C	C	G	K	D	Y	L	L	L	S	A	G	G	D	D	K	I	F	A	W	D	W	K	T	G	K	N	L	S	T	F	D	Y
Template Known Secondary structure									T	T	S								S		T	T										S	S									S	T	T							S	S	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions