Job Description P77774 Confidence 99.50% Date Thu Jan 5 12:32:43 GMT 2012 Rank 22 Aligned Residues 312 % Identity 10% Template c2ovqB_ PDB info PDB header:transcription/cell cycle Chain: B: PDB Molecule:f-box/wd repeat protein 7; PDBTitle: structure of the skp1-fbw7-cyclinedegc complex Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	N	F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A	Q	V	Y	A	L
Query Conservation
Alig confidence											.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	D	D	H	V	I	T	C	.	L	Q	F	C	G	N	R	I	V	S	G	S	D	D	N	T	L	K	V	W	S	A	V	T	G	K	C	L	R	T	L	V	.	.	.	.	.	.	.	.	.	.	G	H	T	G	G	V	W	S	S	Q	M	R	D	N	I	I	I	S	G	S	T	D	R	T	L	K	V	W
Template Known Secondary structure			S	T	T	S					.					T	T							T	T	S							T	T	T									.	.	.	.	.	.	.	.	.	.			S	S									T	T							T	T	S
Template Predicted Secondary structure											.																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2378	.	2380	.	.	.	.	.	.		.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.											.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D	N	G
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	E	T	G	E	C	I	H	T	L	Y	G	H	T	S	T	V	R	C	M	H	L	H	E	K	R	V	V	S	G	S	R	D	A	T	L	R	V	W	D	I	E	T	G	Q	C	L	H	V	L	M	G	H	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	C	V	Q	Y	D	G	R
Template Known Secondary structure			T	T	T											S	S									T	T							T	T	S							T	T	T											S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2447	.	.	2450	.	.	.	.	.	.	.	.	.	2460	.	.	.	.	.	.	.	.	.	2470	.	.	.	.	.	.	.	.	.	2480	.	.	.	.	.	.	.	.	.	2490	.	.	.	.	.	.	.	.	.	2500	.	.	.															.	.	.	.	.	.	2510	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	D	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	V	S	G	A	Y	D	F	M	V	K	V	W	D	P	E	T	E	T	C	L	H	T	L	Q	G	H	T	N	R	V	Y	S	L	Q	F	D	G	I	H	V	V	S	G	S	L	D	T	S	I	R	V	W	D	V	E	T	G	N	C	I	H	T	L	T	G	H	Q	S	L	T	S	G	M	E	L	K	D	N
Template Known Secondary structure								T	T	S							G	G	G	T										S	S									S	S							T	T	S							T	T	T												S									T	T
Template Predicted Secondary structure
Template SS confidence
		2513	.	.	.	.	.	.	2520	.	.	.	.	.	.	.	.	.	2530	.	.	.	.	.	.	.	.	.	2540	.	.	.	.	.	.	.	.	.	2550	.	.	.	.	.	.	.	.	.	2560	.	.	.	.	.	.	.	.	.	2570	.	.	.	.	.	.	.	.	.	2580	.	.	.	.	.	.	.	.	.	2590	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360						.	.	.	.	.	.	.
Predicted Secondary structure																													.	.																																								.	.	.	.	.
Query SS confidence																													.	.																																								.	.	.	.	.
Query Sequence		R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	.	.	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	.	.	.	.	.	K	V	D	S	S	G	F
Query Conservation																													.	.																																								.	.	.	.	.
Alig confidence																													.	.																																								.	.	.	.	.
Template Conservation
Template Sequence		I	L	V	S	G	N	A	D	S	T	V	K	I	W	D	I	K	T	G	Q	C	L	Q	T	L	Q	G	P	N	K	H	Q	S	A	V	T	C	L	Q	F	N	K	N	F	V	I	T	S	S	D	D	G	T	V	K	L	W	D	L	K	T	G	E	F	I	R	N	L	V	T	L	E	S	G	G	S	G	G	V	V
Template Known Secondary structure								T	T	S							T	T	T									S	T	T			S	S									S	S							T	T	S							T	T	T											T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		2593	.	.	.	.	.	.	2600	.	.	.	.	.	.	.	.	.	2610	.	.	.	.	.	.	.	.	.	2620	.	.	.	.	.	.	.	.	.	2630	.	.	.	.	.	.	.	.	.	2640	.	.	.	.	.	.	.	.	.	2650	.	.	.	.	.	.	.	.	.	2660	.	.	.	.	.	.	.	.	.	2670	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380						.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		Q	T	E	P	V	A	A	D	G	K	L	L	I	.	.	.	.	.	Q	A	K	D	G	T	V	Y	S	I	T
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		W	R	I	R	A	S	N	T	K	L	V	C	A	V	G	S	R	N	G	T	E	E	T	K	L	L	V	L	D
Template Known Secondary structure								S	S									S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		2673	.	.	.	.	.	.	2680	.	.	.	.	.	.	.	.	.	2690	.	.	.	.	.	.	.	.	.	2700	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions