|   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | V | V | G | G | D | N | G | R | V | S | A | V | L | M | E | Q | G | Q | M | I | W | Q | Q | R | I | S | Q | A | T | G | S | T | E | I | D | R | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | D | V | D | T | T | P | V | V | V | N | G | V | V | F | A | L | A | Y | N | G | N | L | T | A | L | D | L | R | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|
|
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |
Template Sequence |   |
G | F | W | S | S | G | Q | T | G | E | M | R | I | L | G | I | P | S | M | R | E | L | M | R | V | P | V | F | N | R | C | S | A | T | G | W | G | Q | T | N | E | S | I | R | I | H | Q | R | T | M | T | E | K | T | K | K | Q | L | A | A | N | G | K | K | I | H | D | N | G | D | L | H | H | V | H | M | S | F | T | D |
Template Known Secondary structure |   |
 |  |  |
|
| B | T | T |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | S | S | S |
|
| T | T | T |
| T | T | T | B |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
| S | S |
|
|
|
|
| B |
|
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
  |   |
275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | |
|
. | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | |
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
G | Q | I | M | W | K | R | E | L | G | S | V | N | D | F | I | V | D | G | N | R | I | Y | L | V | D | Q | N | D | R | V | M | A | L | T | I | D | G | G | V | T | L | W | . |
. |
T | Q | S | D | L | L | H | R | L | L | T | S | P | V | L | Y | N | G | N | L | V | V | G | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|   |
|
|
|
|   |
|
|
|   |
|   |
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|   |
|
|
Template Sequence |   |
G | K | Y | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | Y | L | F | M | N | D | K | A | N | T | R | V | A | R | V | R | C | D | V | M | K | T | D | A | I | L | E | I | P | N | A | K | G | I | H | G | M | R | P | Q | K | W | P | R | S | N | Y | V | F | C | N | G | E | D | E | A | P | L | V | N | D |
Template Known Secondary structure |   |
T |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |
|
| S | S | B |
| S |  |  |  |  |  |  |
| S |
| B |
| S | S |
| S |
Template Predicted Secondary structure |   |
|  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
342 | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | E | G | Y | L | H | W | I | N | V | E | D | G | R | F | V | A | Q | Q | K | V | D | S | S | G | F | Q | T | E | P | V | A | A | D | G | K | L | L | I | Q | A | K | D | G |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
Template Sequence |   |
G | S | T | M | T | D | V | A | T | Y | V | N | I | F | T | A | V | D | A | D | K | W | E | V | A | W | Q | V | K | V | S | G | N | L | D | N | C | D | A | D | Y | E | G | K | W | A | F | S | T | S | Y | N | S |
Template Known Secondary structure |   |
S | S | S | T | T |
| G | G | G |
| B |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | S | S |
|
|
|
|  |  |  |
| S | S | S | S |  |  |  |  |  |  | S |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
  |