Job Description P77774 Confidence 99.76% Date Thu Jan 5 12:32:43 GMT 2012 Rank 13 Aligned Residues 162 % Identity 13% Template c2hz6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:endoplasmic reticulum to nucleus signalling 1 PDBTitle: the crystal structure of human ire1-alpha luminal domain Resolution 3.10 Å

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		A	F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	.	.
Query Conservation																																																																																.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	T	L	L	F	V	S	T	L	D	G	S	L	H	A	V	S	K	R	T	G	S	I	K	W	T	L	K	E	D	P	V	L	Q	V	P	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	P	D	P	N	D	G	S	L	Y	T	L	E	G	L	T	K	L	P	F	T	I	P	E
Template Known Secondary structure			T	T							T	T	S							T	T	T												S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T									S				S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
											281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																						.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																						.	.
Query Sequence		.	.	.	.	.	.	.	.	.	R	E	L	G	S	V	N	D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	.	.	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I
Query Conservation		.	.	.	.	.	.	.	.	.																																																						.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																						.	.
Template Conservation
Template Sequence		L	V	Q	A	S	P	C	R	L	Y	M	G	K	K	Q	D	I	W	Y	V	I	D	L	L	L	Y	L	G	R	T	E	Y	T	I	T	M	Y	D	T	K	T	R	E	L	R	W	N	A	T	Y	F	D	Y	A	A	S	L	P	E	D	D	V	D	Y	K	M	S	H	F	V	S	N	G	D	G	L	V	V	T	V
Template Known Secondary structure				T	T		S																																	S	S	S	S	S													B						T	T										T	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G	F	Q	T	E	P	V	A	A	D	G	K	L	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	E	S	G	D	V	L	W	I	Q	N	Y	A	S	P	V	V	A	F	Y	V	W	Q	R	E	G	L	R	K	V
Template Known Secondary structure			T	T	T										S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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