Job Description P77774 Confidence 68.85% Date Thu Jan 5 12:32:43 GMT 2012 Rank 154 Aligned Residues 278 % Identity 9% Template c2gopB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trilobed protease; PDBTitle: the beta-propeller domain of the trilobed protease from pyrococcus2 furiosus reveals an open velcro topology Resolution 2.00 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																																																				.	.	.
Query SS confidence																						.	.	.	.	.	.																																																				.	.	.
Query Sequence		F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	A	D	R	A	.	.	.	.	.	.	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A	.	.	.
Query Conservation																						.	.	.	.	.	.																																																				.	.	.
Alig confidence																						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	Y	L	S	D	P	R	T	K	G	E	L	V	A	Y	V	L	T	K	A	D	N	K	Y	E	N	T	I	V	I	E	N	L	K	N	N	A	R	R	F	I	E	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	P	R	I	S	P	D	G	K	K	I	A	F	M	R	A	N	E	E	K	K
Template Known Secondary structure												T	T												S										T	T	T								T		.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	S									T	T	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A
Query Conservation		.	.
Alig confidence		.	.																																																														.
Template Conservation																																																																	.
Template Sequence		V	S	E	I	W	V	A	D	L	E	T	L	S	S	K	K	I	L	E	A	K	N	I	R	S	L	E	W	N	E	D	S	R	K	L	L	I	V	G	F	K	D	G	E	K	T	T	F	W	I	F	D	T	E	S	E	E	V	I	E	E	F	E	.	K	P	R	F	S	S	G	I	W	H	R	D	K	I	V	V
Template Known Secondary structure										T	T	T										S									T	T	S	S																				T	T	T	T								.			T	T							T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		208	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		V	V	G	G	D	N	G	R	.	.	.	.	.	.	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		N	V	P	H	R	E	I	I	P	Q	Y	F	K	F	W	D	I	Y	I	W	E	D	G	K	E	E	K	M	F	E	.	.	.	.	.	K	V	S	F	Y	A	V	D	S	D	G	E	R	I	L	L	Y	G	K	P	E	K	K	Y	M	S	E	H	N	K	L	Y	I	Y	D	G	K	E	V	M	G	I	L	D	E
Template Known Secondary structure								S	S			S	S										T	T								.	.	.	.	.			S								S	S	S								T	T		T	T		S								S	S	S					S	S	T	T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	G	S	V	N	D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V
Query Conservation
Alig confidence																																									.	.
Template Conservation																																									.	.
Template Sequence		V	D	R	G	V	G	Q	A	K	I	K	D	G	K	V	Y	F	T	L	F	E	E	G	S	V	N	L	Y	I	W	D	G	E	I	K	P	I	A	K	.	.	G	R	H	W	I	M	G	F	D	V	D	E	I	V	V	Y	L	K	E	T	A	T	R	L	R	E	L	F	T	W	D	G	E	E	K
Template Known Secondary structure													T	T									T	T								S	S	S							.	.	S	S	S								S	S	S								S	S	S								S	S	S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions