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Job DescriptionP77774
Confidence100.00%DateThu Jan 5 12:32:43 GMT 2012
Rank3Aligned Residues362
% Identity20%Templatec1yiqA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:quinohemoprotein alcohol dehydrogenase; PDBTitle: molecular cloning and structural analysis of2 quinohemoprotein alcohol dehydrogenase adhiig from3 pseudomonas putida hk5. compariison to the other4 quinohemoprotein alcohol dehydrogenase adhiib found in the5 same microorganism.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  CSLFNSEEDVVKMSPLPTV. . ENQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSL
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Template Sequence  WMSTGRTYDEQRYSPLKQISDQNVGQLGLAWSYKLDLDRG. . . VEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDP
Template Known Secondary structure  B
STTSSTT





SS
TTTGGG
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S
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TT
GGG
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   98.100......... 110.........120.........130.........140.........150 .........160.......
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Query Sequence  AEKDGWFSKEPA. LLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE. . . . . . ALSRPVVSDGLVLIHTS. . .
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Template Sequence  QSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE
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GGGGGG
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TTSTTT



S
TTS

B

S

TT

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TT
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   168.170.........180......... 190.........200.........210.....
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Query Sequence  . . . NGQLQALNEADGAVKWTVNLDM. . . . . . . . . . . . . . . . . . . . . . . . . . . . PSLSLRGESAPTTAFGAAVVGGDNGR.
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Template Sequence  FGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSL
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B
TTT

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TTS


STT

SST




S
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S
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   179180.........190.........200.........210.........220.........230.........240.........250........
 
   216...220.........230.........240.........250....... ..260.........270....
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Query Sequence  . . . . . . . . . . . . . . . . . . VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGV. . . VFALAYNGNLTALDLRS
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Template Sequence  WDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT
Template Known Secondary structure  S
TT
S

TTTTTTT

SSTT

S




S
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TTSTTT
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   259260.........270.........280.........290.........300.........310.........320.........330........
 
   275....280.........290... ......300..
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Query Sequence  GQIMWKRELGSVNDFIVDG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NRIYLVDQN. . . . . . . . .
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Template Sequence  GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIP
Template Known Secondary structure 

SS

SSTTTT

TTTSSS
SS
TT
SS
SS

TTTT



S
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   339340.........350.........360.........370.........380.........390.........400.........410........
 
   303......310.........320.........330.........340......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYL
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Template Sequence  EAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRV
Template Known Secondary structure  S




S
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TTS
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   419420.........430.........440.........450.........460.........470.........480.........490........
 
   347..350.........360.........370... ......380.....
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Query Sequence  HWINVEDGRFVAQQKVDSSGFQTEPVA. . ADGKLLIQAKDG
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Template Sequence  IAYAADTGEKLWEQPAASG. VMAAPVTYSVDGEQYVTFMAG
Template Known Secondary structure  TTT


SS
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S

TT
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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