Job Description P77774 Confidence 98.82% Date Thu Jan 5 12:32:43 GMT 2012 Rank 66 Aligned Residues 272 % Identity 9% Template c1p22A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:f-box/wd-repeat protein 1a; PDBTitle: structure of a beta-trcp1-skp1-beta-catenin complex:2 destruction motif binding and lysine specificity on the3 scfbeta-trcp1 ubiquitin ligase Resolution 2.95 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	G	N	F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A	Q	V	Y	A
Query Conservation
Alig confidence														.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																														.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	T	S	K	G	V	Y	C	L	Q	Y	.	.	D	D	Q	K	I	V	S	G	L	R	D	N	T	I	K	I	W	D	K	N	T	L	E	C	K	R	I	L	T	.	.	.	.	.	.	.	.	.	.	G	H	T	G	S	V	L	C	L	Q	Y	D	E	R	V	I	I	T	G	S	S	D	S	T	V	R	V
Template Known Secondary structure			S	S										.	.		S	S							S	S	S							S	S	S									.	.	.	.	.	.	.	.	.	.			S	S									S	S							T	T	S
Template Predicted Secondary structure														.	.																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.											.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D	N
Query Conservation
Alig confidence																																																													.	.
Template Conservation																																																													.	.
Template Sequence		W	D	V	N	T	G	E	M	L	N	T	L	I	H	H	C	E	A	V	L	H	L	R	F	N	N	G	M	M	V	T	C	S	K	D	R	S	I	A	V	W	D	M	A	S	P	T	D	I	T	L	R	R	V	L	V	G	H	R	.	.	A	A	V	N	V	V	D	F	D	D	K	Y	I	V	S	A	S	G	D
Template Known Secondary structure				S	S	S												S									T	T							T	T	S								S	S	S	S												S	.	.	S									T	T							T	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	.	.
Query Conservation																																																																																.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	I	K	V	W	N	T	S	T	C	E	F	V	R	T	L	.	.	.	.	.	.	.	.	.	.	.	N	G	H	K	R	G	I	A	C	L	Q	Y	R	D	R	L	V	V	S	G	S	S	D	N	T	I	R	L	W	D	I	E	C	G	A	C	L	R	V	L	E	G	H	E	E	L	V	R	C	I	R	F
Template Known Secondary structure		S							T	T	T								.	.	.	.	.	.	.	.	.	.	.				S	S									T	T							T	T	S							T	T	T											S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.												.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.									.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.
Query Sequence		D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	.	.	.	.	.	.	.	.	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N
Query Conservation																																	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	K	R	I	V	S	G	A	Y	D	G	K	I	K	V	W	D	L	V	A	A	L	D	P	R	A	P	A	G	T	L	C	L	R	T	L	V	E	H	S	G	R	V	F	R	L	Q	F	D	E	F	Q	I	V	S	S	S	H	D	D	T	I	L	I	W	D
Template Known Secondary structure			S	S							T	T	S											T	S	T	T	S		T	T	T	T									S	S									S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions