Job Description P77774 Confidence 98.18% Date Thu Jan 5 12:32:43 GMT 2012 Rank 88 Aligned Residues 330 % Identity 9% Template c1nr0A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:actin interacting protein 1; PDBTitle: two seven-bladed beta-propeller domains revealed by the2 structure of a c. elegans homologue of yeast actin3 interacting protein 1 (aip1). Resolution 1.70 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		G	I	G	N	F	Y	S	N	L	H	P	A	L	A	D	N	V	V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	.	.	K	A	Q	V	Y
Query Conservation																																																																											.	.
Alig confidence																																													.	.	.	.	.	.																									.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		E	H	S	H	Q	T	T	V	A	K	T	S	P	S	G	Y	Y	C	A	S	G	D	V	H	G	N	V	R	I	W	D	T	T	Q	T	T	H	I	L	K	T	T	I	.	.	.	.	.	.	P	V	F	S	G	P	V	K	D	I	S	W	D	S	E	S	K	R	I	A	A	V	G	E	G	R	E	R	F	G	H
Template Known Secondary structure				S	S									T	T	S	S							T	T	S							S	S	S	T	T								.	.	.	.	.	.			S	S	S									T	T	S										S	S		S
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	L	F	D	T	G	T	S	N	G	N	L	T	G	Q	A	R	A	M	N	S	V	D	F	K	P	S	R	P	F	R	I	I	S	G	S	D	D	N	T	V	A	I	F	E	G	P	P	F	K	F	K	S	T	F	G	E	H	T	K	F	V	H	S	V	R	Y	N	P	D	G	S	L	F	A	S	T	G	G
Template Known Secondary structure					T	T	T			B		B						S	S									S	S	S	S								T	T	S							T	T	T	B										S	S									T	T	S	S							T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.						.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	.	.	.	.	.	S	V	N
Query Conservation																																																																										.	.	.	.	.
Alig confidence																.	.																																																									.	.	.	.	.
Template Conservation																.	.
Template Sequence		D	G	T	I	V	L	Y	N	G	V	D	G	T	K	.	.	T	G	V	F	E	D	D	S	L	K	N	V	A	H	S	G	S	V	F	G	L	T	W	S	P	D	G	T	K	I	A	S	A	S	A	D	K	T	I	K	I	W	N	V	A	T	L	K	V	E	K	T	I	P	V	G	T	R	I	E	D	Q	Q	L
Template Known Secondary structure		T	S							T	T	T				.	.					B		T	T	S	S	S		S	S	S	S									T	T	S	S							T	T	S							T	T	T	T										S	S	G	G	G
Template Predicted Secondary structure																.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	.	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		G	I	I	W	T	K	Q	A	L	V	S	I	S	A	N	G	F	I	N	F	V	N	P	E	L	G	S	I	D	Q	V	R	Y	G	H	N	K	A	I	T	A	L	S	S	S	A	D	G	K	T	L	F	S	A	D	A	E	G	H	I	N	S	W	D	I	S	T	G	I	S	N	R	V	F	P	D	V	H	A	T
Template Known Secondary structure							S	S							T	T								T	T	T	T										S	S									T	T	S	S							T	T	S							T	T	T							S	S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		367	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		F	Q	T	E	P	V	A	A	.	D	G	K	L	L	I	Q	A	K	D	G	T	V	Y	S	I	T	R
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		M	I	T	G	I	K	T	T	S	K	G	D	L	F	T	V	S	W	D	D	H	L	K	V	V	P	A
Template Known Secondary structure										T	T	S							T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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