Job Description P77774 Confidence 98.53% Date Thu Jan 5 12:32:43 GMT 2012 Rank 79 Aligned Residues 271 % Identity 11% Template c1fwxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from p. denitrificans Resolution 1.60 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		V	Y	A	A	D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	.	W	Q	T	K	V	A	G	E
Query Conservation																																																																									.
Alig confidence																																																			.	.	.	.	.	.																	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		F	W	S	S	G	Q	S	G	E	M	R	I	L	G	I	P	S	M	R	E	L	M	R	V	P	V	F	N	R	C	S	A	T	G	W	G	Q	T	N	E	S	V	R	I	H	E	R	T	M	.	.	.	.	.	.	S	E	R	T	K	K	F	L	A	A	N	G	K	R	I	H	D	N	G	D	L	H	H	V	H
Template Known Secondary structure						B	T	T									T	T									S	S	S			T	T	T		T	T	T	B									T	T		.	.	.	.	.	.											T	T		S	S						B
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	S	R	P	V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	S	F	T	E	G	K	Y	D	G	R	F	L	F	M	N	D	K	A	N	T	R	V	A	R	V	R	C	D	V	M	K	C	D	A	I	L	E	I	P	N	A	K	G	I	H	G	L	R	P	Q	K	W	P	R	S	N	Y	V	F	C	N	G	E	D	E	T	P	L	V	N	D	G	T	N	M	E	D	V	A
Template Known Secondary structure						T	T												T	T	T	T							T	T	T	T									S	S			S									S	S	B		S								S				S	S		S	S	S	S	T	T		G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
					214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A	T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I
Query Conservation		.	.	.
Alig confidence		.	.	.																																																						.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		N	Y	V	N	V	F	T	A	V	D	A	D	K	W	E	V	A	W	Q	V	L	V	S	G	N	L	D	N	C	D	A	D	Y	E	G	K	W	A	F	S	T	S	Y	N	S	E	K	G	M	T	L	P	E	M	T	A	.	.	.	.	.	.	.	A	E	M	D	H	I	V	V	F	N	I	A	E	I	E	K	A
Template Known Secondary structure		G										T	T	T	T									S	S									S	S	S	S							S		T	T			S	S					T		.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.								.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	G	N	L	V	V	G	D	.	S	E	G	Y	L	H	W	I	N	V	E	D	G	R
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		I	A	A	G	D	Y	Q	E	L	N	G	V	K	V	V	D	G	R	K	E	A	S	S	L	F	T	R	Y	I	P	I	A	N	N	P	H	G	C	N	M	A	P	D	K	K	H	L	C	V	A	G	K	L	S	P	T	V	T	V	L	D	V	T	R	F	D
Template Known Secondary structure				T	T		S				T	T							S	G	G	G			S	S								S	S								T	T	S	S							T	T	S	S	B						G	G	G
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions