Job Description P77774 Confidence 36.32% Date Thu Jan 5 12:32:43 GMT 2012 Rank 167 Aligned Residues 270 % Identity 10% Template c1bpoA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein (clathrin); PDBTitle: clathrin heavy-chain terminal domain and linker Resolution 2.60 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	G	L	V	K	A	L	N	A	D	D	G	K	E	I	W	S	V	S	L	A	E	K	D	G	W	F	S	K	E	P	A	L	L	S	G	G	V	T	V	S	G	G	H	V	Y	I	G	S	E	K	A	Q	V	Y	A	L	N	T	S	D	G	T	V	A	W	Q	T	K	V	A	G	E	A	L	S	R	P
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	Q	A	Q	V	V	I	I	D	M	N	D	P	S	N	P	I	R	R	P	I	S	A	D	S	A	I	M	N	P	.	.	.	.	.	.	.	.	.	.	.	.	A	S	K	V	I	A	L	K	A	G	K	T	L	Q	I	F	N	I	E	M	K	S	K	M	K	A	H	T	M	T	D	D	V	T	F	W	K
Template Known Secondary structure		T	T									T	T	S	T	T	S									S						S	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S							T	T							T	T	T	T									S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.													.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	S	D	G	L	V	L	I	H	T	S	N	G	Q	L	Q	A	L	N	E	A	D	G	A	V	K	W	T	V	N	L	D	M	P	S	L	S	L	R	G	E	S	A	P	T	T	A	F	G	A	A	V	V	G	G	D	N	G	R	V	S	A	V	L	M	E	Q	G	Q	M	I	W	Q	Q	R	I	S	Q	A
Query Conservation
Alig confidence																																																								.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		W	I	S	L	N	T	V	A	L	V	T	D	N	A	V	Y	H	W	S	M	E	G	E	S	Q	P	V	K	M	F	D	R	H	S	S	L	A	G	C	Q	I	I	N	Y	R	T	D	A	K	Q	K	W	L	L	.	.	.	.	.	.	L	T	G	I	S	A	Q	Q	N	R	V	V	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T							S	S							S	S	S	S											G	G	G	T	T										T	T	S	S				.	.	.	.	.	.								T	T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		T	G	S	T	E	I	D	R	L	S	D	V	D	T	T	P	V	V	V	N	G	V	V	F	A	L	A	Y	N	G	N	L	T	A	L	D	L	R	S	G	Q	I	M	W	K	R	E	L	G	S	V	N	D	F	I	V	D	G	N	R	I	Y	L	V	D	Q	N	D	R	V	M	A	L	T	I	D	G	G	V	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	M	Q	L	Y	S	V	D	R	K	V	S	Q	P	I	E	G	H	A	A	S	F	A	Q	F	K	M	E	G	N	A	E	E	S	T	L	F	C	F	A	V	R	G	Q	A	G	G	K	L	H	I	I	E	V	G	T	P	P	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T									S										T	T		S	S											S	T	T										S				T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
												315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																					.	.																																										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																					.	.																																										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	T	L	W	T	Q	S	D	L	L	H	R	L	L	T	S	P	V	L	Y	N	.	.	G	N	L	V	V	G	D	S	E	G	Y	L	H	W	I	N	V	E	D	G	R	F	V	A	Q	Q	K	V	D	S	S	G	F	Q	T	E	P	V	A	A	D	.	G	K	L	L	I	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.																					.	.																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.																					.	.																																										.
Template Conservation
Template Sequence		G	N	Q	P	F	P	K	K	A	V	D	V	F	F	P	P	E	A	Q	N	D	F	P	V	A	M	Q	I	S	E	K	H	D	V	V	F	L	I	T	K	Y	G	Y	I	H	L	Y	D	L	E	T	G	T	C	I	Y	M	N	R	I	S	G	E	T	I	F	V	T	A	P	H	E	A	T	A	G	I	I	G	V
Template Known Secondary structure		T															T	T	S	T	T										T	T	T	T							T	T	S							T	T	T											S	S									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	D	G	T	V	Y	S	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	K	G	Q	V	L	S	V	C
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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