Job Description P75617 Confidence 44.28% Date Thu Jan 5 12:12:48 GMT 2012 Rank 9 Aligned Residues 42 % Identity 17% Template c3u2bC_ PDB info PDB header:transcription/dna Chain: C: PDB Molecule:transcription factor sox-4; PDBTitle: structure of the sox4 hmg domain bound to dna Resolution 2.40 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	V	S	K	R	L	K	L	K	A	D	K	E	M	S	T	F	E	I	E	Q	Q	L	L	E	Q	F	L	R	N	T	W	K	K	M	D	E	E	H	K	Q	E	F	L	H	A
Query Conservation
Alig confidence																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		S	Q	I	E	R	R	K	I	M	E	Q	S	P	D	M	H	N	A	E	.	.	.	.	.	.	I	S	K	R	L	G	K	R	W	K	L	L	K	D	S	D	K	I	P	F	I	Q	E
Template Known Secondary structure											T	T	S	T	T	S					.	.	.	.	.	.												S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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