Job Description P75617 Confidence 16.05% Date Thu Jan 5 12:12:48 GMT 2012 Rank 61 Aligned Residues 62 % Identity 19% Template c3korD_ PDB info PDB header:transcription Chain: D: PDB Molecule:possible trp repressor; PDBTitle: crystal structure of a putative trp repressor from staphylococcus2 aureus Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		L	Q	H	C	S	E	E	Q	L	A	N	F	A	R	L	L	T	.	.	H	N	E	K	G	K	T	R	L	S	S	V	L	M	R	N	E	L	F	K	S	M	E	G	H	P	E	Q	H	R	R	N	W	Q	L	I	A	G	E	L	Q	H	F	G	G	D	S	I	A	N	K	L	R	G	H	G	K	L	Y	R	A
Query Conservation																			.	.
Alig confidence																			.	.																										.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	K	L	R	G	A	A	L	D	E	L	F	D	A	I	L	T	L	E	N	R	E	E	C	Y	Q	F	F	D	D	L	C	T	V	N	E	I	Q	S	L	S	Q	R	.	.	.	.	.	.	.	.	L	Q	V	A	K	X	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	Y	T	Y	A	T
Template Known Secondary structure		G	G	G	G		S												T			S												S												.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.														.	.	.	.	.	60	.
		92	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	Q	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions